RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 A0A1W2PQ45 241 aaPredicted RBP31.19■■■□□ 2.58
LINC00271-207ENST00000580741 A0A1W2PQY0 241 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 CYTH3O43739 400 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 KCNA10Q16322 511 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 RGS22Q8NE09 1264 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 TMEM87BQ96K49 555 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 PIGSQ96S52 555 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 AMNQ9BXJ7 453 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 UPF3AQ9H1J1 476 aaKnown RBP31.19■■■□□ 2.58
LINC00271-207ENST00000580741 PRO3102Q9H379 93 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 VTA1Q9NP79 307 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 MRPL11Q9Y3B7 192 aaKnown RBP31.19■■■□□ 2.58
LINC00271-207ENST00000580741 MYH6P13533 1939 aa31.19■■■□□ 2.58
LINC00271-207ENST00000580741 BAZ2BQ9UIF8 2168 aaKnown RBP31.19■■■□□ 2.58
LINC00271-207ENST00000580741 ZBTB5O15062 677 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 SMPD1P17405 629 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 ACLYP53396 1101 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 GJA9P57773 515 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 CCSAPQ6IQ19 270 aaPredicted RBP31.18■■■□□ 2.58
LINC00271-207ENST00000580741 RASEFQ8IZ41 740 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 SYTL5Q8TDW5 730 aaPredicted RBP31.18■■■□□ 2.58
LINC00271-207ENST00000580741 PIBF1Q8WXW3 757 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 MTA3Q9BTC8 594 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 RIOX1Q9H6W3 641 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 SPC25Q9HBM1 224 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 PPP4R2Q9NY27 417 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 COL20A1Q9P218 1284 aa31.18■■■□□ 2.58
LINC00271-207ENST00000580741 DDAH1O94760 285 aa31.17■■■□□ 2.58
LINC00271-207ENST00000580741 CENPBP07199 599 aaPredicted RBP31.17■■■□□ 2.58
LINC00271-207ENST00000580741 SNX17Q15036 470 aa31.17■■■□□ 2.58
LINC00271-207ENST00000580741 RAB11FIP4Q86YS3 637 aa31.17■■■□□ 2.58
LINC00271-207ENST00000580741 TSEN34Q9BSV6 310 aaKnown RBP31.17■■■□□ 2.58
LINC00271-207ENST00000580741 GNEQ9Y223 722 aaKnown RBP31.17■■■□□ 2.58
LINC00271-207ENST00000580741 CCDC69A6NI79 296 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 CTAGE5O15320 804 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 RXRAP19793 462 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 CST5P28325 142 aaPredicted RBP31.16■■■□□ 2.58
LINC00271-207ENST00000580741 BEX3Q00994 111 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 PDE4DQ08499 809 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 TLK2Q86UE8 772 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 MCF2L2Q86YR7 1114 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 DNERQ8NFT8 737 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 TAAR1Q96RJ0 339 aa31.16■■■□□ 2.58
LINC00271-207ENST00000580741 LOC102724159A0A0B4J2E5 919 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 OPLAHO14841 1288 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 EDNRBP24530 442 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 MAGEA10P43363 369 aaPredicted RBP31.15■■■□□ 2.58
LINC00271-207ENST00000580741 PWP2Q15269 919 aaKnown RBP31.15■■■□□ 2.58
LINC00271-207ENST00000580741 ADCK5Q3MIX3 580 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 GNASQ5JWF2 1037 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 IQSEC1Q6DN90 963 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 CTCFLQ8NI51 663 aaPredicted RBP31.15■■■□□ 2.58
LINC00271-207ENST00000580741 TCEANC2Q96MN5 208 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 NEK1Q96PY6 1258 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 GDF15Q99988 308 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 PCDHA1Q9Y5I3 950 aa31.15■■■□□ 2.58
LINC00271-207ENST00000580741 MOXD2PA6NHM9 499 aa31.14■■■□□ 2.58
LINC00271-207ENST00000580741 DYNC1LI2O43237 492 aaPredicted RBP31.14■■■□□ 2.58
LINC00271-207ENST00000580741 CFBP00751 764 aa31.14■■■□□ 2.58
LINC00271-207ENST00000580741 STARD7Q9NQZ5 370 aa31.14■■■□□ 2.58
LINC00271-207ENST00000580741 ASGR1P07306 291 aa31.13■■■□□ 2.57
LINC00271-207ENST00000580741 LIFRP42702 1097 aa31.13■■■□□ 2.57
LINC00271-207ENST00000580741 TMTC2Q8N394 836 aa31.13■■■□□ 2.57
LINC00271-207ENST00000580741 PLEKHA8P1O95397 391 aa31.12■■■□□ 2.57
LINC00271-207ENST00000580741 MDM2Q00987 491 aaPredicted RBP31.12■■■□□ 2.57
LINC00271-207ENST00000580741 TLE2Q04725 743 aa31.12■■■□□ 2.57
LINC00271-207ENST00000580741 PCSK9Q8NBP7 692 aaKnown RBP31.12■■■□□ 2.57
LINC00271-207ENST00000580741 MPHOSPH6Q99547 160 aaKnown RBP31.12■■■□□ 2.57
LINC00271-207ENST00000580741 MAP3K14Q99558 947 aa31.12■■■□□ 2.57
LINC00271-207ENST00000580741 WDR11Q9BZH6 1224 aa31.12■■■□□ 2.57
LINC00271-207ENST00000580741 AP5M1Q9H0R1 490 aa31.12■■■□□ 2.57
LINC00271-207ENST00000580741 PRDM5Q9NQX1 630 aaPredicted RBP31.12■■■□□ 2.57
LINC00271-207ENST00000580741 KIF5BP33176 963 aa31.11■■■□□ 2.57
LINC00271-207ENST00000580741 TSGA10IPQ3SY00 556 aa31.11■■■□□ 2.57
LINC00271-207ENST00000580741 C1orf53Q5VUE5 145 aa31.11■■■□□ 2.57
LINC00271-207ENST00000580741 SLC12A7Q9Y666 1083 aa31.11■■■□□ 2.57
LINC00271-207ENST00000580741 PNMA6FA0A0J9YX94 578 aa31.1■■■□□ 2.57
LINC00271-207ENST00000580741 PQBP1O60828 265 aaKnown RBP31.1■■■□□ 2.57
LINC00271-207ENST00000580741 NKX3-2P78367 333 aa31.1■■■□□ 2.57
LINC00271-207ENST00000580741 CMTR1Q8N1G2 835 aaKnown RBP31.1■■■□□ 2.57
LINC00271-207ENST00000580741 GLT1D1Q96MS3 346 aa31.1■■■□□ 2.57
LINC00271-207ENST00000580741 RMDN3Q96TC7 470 aa31.1■■■□□ 2.57
LINC00271-207ENST00000580741 MAF1Q9H063 256 aa31.1■■■□□ 2.57
LINC00271-207ENST00000580741 RBM47A0AV96 593 aaKnown RBP31.09■■■□□ 2.57
LINC00271-207ENST00000580741 EIF2AK2P19525 551 aaKnown RBP31.09■■■□□ 2.57
LINC00271-207ENST00000580741 HOXA13P31271 388 aaPredicted RBP31.09■■■□□ 2.57
LINC00271-207ENST00000580741 FXR1P51114 621 aaKnown RBP eCLIP31.09■■■□□ 2.57
LINC00271-207ENST00000580741 HSD17B4P51659 736 aa31.09■■■□□ 2.57
LINC00271-207ENST00000580741 FSCN1Q16658 493 aaKnown RBP31.09■■■□□ 2.57
LINC00271-207ENST00000580741 DUSP28Q4G0W2 176 aa31.09■■■□□ 2.57
LINC00271-207ENST00000580741 ERICH6BQ5W0A0 696 aa31.09■■■□□ 2.57
LINC00271-207ENST00000580741 NSUN6Q8TEA1 469 aaKnown RBP31.09■■■□□ 2.57
LINC00271-207ENST00000580741 VTI1AQ96AJ9 217 aa31.09■■■□□ 2.57
LINC00271-207ENST00000580741 SPZ1Q9BXG8 430 aa31.09■■■□□ 2.57
LINC00271-207ENST00000580741 PDLIM7Q9NR12 457 aa31.09■■■□□ 2.57
LINC00271-207ENST00000580741 PRKAG2Q9UGJ0 569 aa31.09■■■□□ 2.57
LINC00271-207ENST00000580741 B4DLN1 442 aa31.08■■■□□ 2.57
LINC00271-207ENST00000580741 MRPL12P52815 198 aaKnown RBP31.08■■■□□ 2.57
LINC00271-207ENST00000580741 EXOSC10Q01780 885 aaKnown RBP31.08■■■□□ 2.57
LINC00271-207ENST00000580741 CXCL17Q6UXB2 119 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms