RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 RASGRP2Q7LDG7 609 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 IFNL3Q8IZI9 196 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 PPP1R13LQ8WUF5 828 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 LRFN3Q9BTN0 628 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 VTA1Q9NP79 307 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 PATL2C9JE40 543 aaKnown RBP22.72■■□□□ 1.23
NDEL1-209ENST00000580738 SUPT20HL2P0C7V6 817 aa22.72■■□□□ 1.23
NDEL1-209ENST00000580738 GNAT2P19087 354 aa22.72■■□□□ 1.23
NDEL1-209ENST00000580738 DUSP28Q4G0W2 176 aa22.72■■□□□ 1.23
NDEL1-209ENST00000580738 MORC4Q8TE76 937 aa22.72■■□□□ 1.23
NDEL1-209ENST00000580738 TLL1O43897 1013 aa22.71■■□□□ 1.23
NDEL1-209ENST00000580738 PURAQ00577 322 aaKnown RBP22.71■■□□□ 1.23
NDEL1-209ENST00000580738 TAP1Q03518 808 aa22.71■■□□□ 1.23
NDEL1-209ENST00000580738 ARNTL2Q8WYA1 636 aa22.71■■□□□ 1.23
NDEL1-209ENST00000580738 PRR12Q9ULL5 1215 aa22.71■■□□□ 1.23
NDEL1-209ENST00000580738 PLA2G6O60733 806 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 MYL3P08590 195 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 PDE4BQ07343 736 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 RCSD1Q6JBY9 416 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 SEC62Q99442 399 aaKnown RBP22.7■■□□□ 1.22
NDEL1-209ENST00000580738 WDR11Q9BZH6 1224 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 POLR3EQ9NVU0 708 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 CCPG1Q9ULG6 757 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 COG5Q9UP83 839 aa22.7■■□□□ 1.22
NDEL1-209ENST00000580738 ZFYP08048 801 aaPredicted RBP22.69■■□□□ 1.22
NDEL1-209ENST00000580738 ACTN1P12814 892 aa22.69■■□□□ 1.22
NDEL1-209ENST00000580738 NBPF20Q3BBV1 942 aa22.69■■□□□ 1.22
NDEL1-209ENST00000580738 SPRED2Q7Z698 418 aa22.69■■□□□ 1.22
NDEL1-209ENST00000580738 SLC9A7Q96T83 725 aa22.69■■□□□ 1.22
NDEL1-209ENST00000580738 NMT2O60551 498 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 PPARAQ07869 468 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 BAATQ14032 418 aaPredicted RBP22.68■■□□□ 1.22
NDEL1-209ENST00000580738 FAM47CQ5HY64 1035 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 HERC6Q8IVU3 1022 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 PHOSPHO2Q8TCD6 241 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 KHSRPQ92945 711 aaKnown RBP eCLIP22.68■■□□□ 1.223e-6■■■□□ 18.1
NDEL1-209ENST00000580738 INCENPQ9NQS7 918 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 IL17RBQ9NRM6 502 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 STX8Q9UNK0 236 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 MTMR7Q9Y216 660 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 SCN5AQ14524 2016 aa22.68■■□□□ 1.22
NDEL1-209ENST00000580738 LCTP09848 1927 aa22.67■■□□□ 1.22
NDEL1-209ENST00000580738 ICAM1P05362 532 aa22.67■■□□□ 1.22
NDEL1-209ENST00000580738 IQCF3P0C7M6 154 aa22.67■■□□□ 1.22
NDEL1-209ENST00000580738 ALDH5A1P51649 535 aaPredicted RBP22.67■■□□□ 1.22
NDEL1-209ENST00000580738 GRB10Q13322 594 aa22.67■■□□□ 1.22
NDEL1-209ENST00000580738 HLA-CQ95604 372 aa22.67■■□□□ 1.22
NDEL1-209ENST00000580738 MTG1Q9BT17 334 aaPredicted RBP22.67■■□□□ 1.22
NDEL1-209ENST00000580738 NACAP1Q9BZK3 213 aa22.67■■□□□ 1.22
NDEL1-209ENST00000580738 FTOQ9C0B1 505 aaKnown RBP eCLIP22.67■■□□□ 1.22
NDEL1-209ENST00000580738 RBM47A0AV96 593 aaKnown RBP22.66■■□□□ 1.22
NDEL1-209ENST00000580738 RFC2P35250 354 aa22.66■■□□□ 1.22
NDEL1-209ENST00000580738 CPT1AP50416 773 aa22.66■■□□□ 1.22
NDEL1-209ENST00000580738 TMEM31Q5JXX7 168 aa22.66■■□□□ 1.22
NDEL1-209ENST00000580738 OR6J1Q8NGC5 347 aa22.66■■□□□ 1.22
NDEL1-209ENST00000580738 GPHNQ9NQX3 736 aaPredicted RBP22.66■■□□□ 1.22
NDEL1-209ENST00000580738 HCN4Q9Y3Q4 1203 aa22.66■■□□□ 1.22
NDEL1-209ENST00000580738 NFIBO00712 420 aa22.65■■□□□ 1.22
NDEL1-209ENST00000580738 LPXNO60711 386 aa22.65■■□□□ 1.22
NDEL1-209ENST00000580738 SLC3A2P08195 630 aaKnown RBP22.65■■□□□ 1.22
NDEL1-209ENST00000580738 RETREG2Q8NC44 543 aa22.65■■□□□ 1.22
NDEL1-209ENST00000580738 NAPBQ9H115 298 aa22.65■■□□□ 1.22
NDEL1-209ENST00000580738 C11orf16Q9NQ32 467 aa22.65■■□□□ 1.22
NDEL1-209ENST00000580738 ADD3Q9UEY8 706 aaKnown RBP22.65■■□□□ 1.22
NDEL1-209ENST00000580738 ARIH1Q9Y4X5 557 aaPredicted RBP22.65■■□□□ 1.22
NDEL1-209ENST00000580738 PITPNM1O00562 1244 aa22.64■■□□□ 1.21
NDEL1-209ENST00000580738 SLC16A2P36021 539 aa22.64■■□□□ 1.21
NDEL1-209ENST00000580738 TTBK2Q6IQ55 1244 aa22.64■■□□□ 1.21
NDEL1-209ENST00000580738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.64■■□□□ 1.21
NDEL1-209ENST00000580738 PTPDC1A2A3K4 754 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 TSPY2A6NKD2 308 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 KIF28PB7ZC32 967 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 CTDSPL2Q05D32 466 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 CCDC96Q2M329 555 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 NFRKBQ6P4R8 1299 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 TMCO2Q7Z6W1 182 aaPredicted RBP22.63■■□□□ 1.21
NDEL1-209ENST00000580738 COPS5Q92905 334 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 GPATCH3Q96I76 525 aa22.63■■□□□ 1.21
NDEL1-209ENST00000580738 RANBP17Q9H2T7 1088 aaKnown RBP22.63■■□□□ 1.21
NDEL1-209ENST00000580738 CHMP4BQ9H444 224 aaKnown RBP22.63■■□□□ 1.21
NDEL1-209ENST00000580738 LCHNA4D1U4 455 aa22.62■■□□□ 1.21
NDEL1-209ENST00000580738 FAM86C2PA6NEL3 165 aa22.62■■□□□ 1.21
NDEL1-209ENST00000580738 PPP4R3BQ5MIZ7 849 aa22.62■■□□□ 1.21
NDEL1-209ENST00000580738 SLC30A10Q6XR72 485 aa22.62■■□□□ 1.21
NDEL1-209ENST00000580738 CD320Q9NPF0 282 aa22.62■■□□□ 1.21
NDEL1-209ENST00000580738 A6NJR5 290 aa22.61■■□□□ 1.21
NDEL1-209ENST00000580738 FOXP2O15409 715 aa22.61■■□□□ 1.21
NDEL1-209ENST00000580738 CALML3P27482 149 aa22.61■■□□□ 1.21
NDEL1-209ENST00000580738 SCN10AQ9Y5Y9 1956 aa22.61■■□□□ 1.21
NDEL1-209ENST00000580738 LOC102724159A0A0B4J2E5 919 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 RBAK-RBAKDNI3L0D1 243 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 GPR37L1O60883 481 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 CHMP4BP1P59074 171 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 BFSP2Q13515 415 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 GPNMBQ14956 572 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 PPP2R5BQ15173 497 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 PWP2Q15269 919 aaKnown RBP22.6■■□□□ 1.21
NDEL1-209ENST00000580738 BRDTQ58F21 947 aaPredicted RBP22.6■■□□□ 1.21
NDEL1-209ENST00000580738 DCAF4Q8WV16 495 aa22.6■■□□□ 1.21
NDEL1-209ENST00000580738 CLEC4DQ8WXI8 215 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms