RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
SKA2-205ENST00000580541 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
SKA2-205ENST00000580541 KRT40Q6A162 431 aa16.38■□□□□ 0.21
SKA2-205ENST00000580541 NSMFQ6X4W1 530 aa16.38■□□□□ 0.21
SKA2-205ENST00000580541 CLEC4DQ8WXI8 215 aa16.38■□□□□ 0.21
SKA2-205ENST00000580541 EFCC1Q9HA90 598 aa16.38■□□□□ 0.21
SKA2-205ENST00000580541 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
SKA2-205ENST00000580541 SPDYE3A6NKU9 549 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 TNPO2O14787 897 aaKnown RBP16.37■□□□□ 0.21
SKA2-205ENST00000580541 MMP1P03956 469 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 PTPREP23469 700 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 KRT2P35908 639 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 GHRHRQ02643 423 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 GPR142Q7Z601 462 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 BLIDQ8IZY5 108 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 REXO1Q8N1G1 1221 aaKnown RBP16.37■□□□□ 0.21
SKA2-205ENST00000580541 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 AIFM3Q96NN9 605 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 PORCNQ9H237 461 aa16.37■□□□□ 0.21
SKA2-205ENST00000580541 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
SKA2-205ENST00000580541 SMCHD1A6NHR9 2005 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 POTEB2H3BUK9 544 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 NFIBO00712 420 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 STX6O43752 255 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 SYT1P21579 422 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 PSMC4P43686 418 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 HSD17B4P51659 736 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 AP3B2Q13367 1082 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 BAATQ14032 418 aaPredicted RBP16.36■□□□□ 0.21
SKA2-205ENST00000580541 POTEHQ6S545 545 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 FOXP1Q9H334 677 aaPredicted RBP16.36■□□□□ 0.21
SKA2-205ENST00000580541 R3HDMLQ9H3Y0 253 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 CYP39A1Q9NYL5 469 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 KCNJ14Q9UNX9 436 aa16.36■□□□□ 0.21
SKA2-205ENST00000580541 LOC102724159A0A0B4J2E5 919 aa16.35■□□□□ 0.21
SKA2-205ENST00000580541 PEX10O60683 326 aa16.35■□□□□ 0.21
SKA2-205ENST00000580541 RPS6P62753 249 aaKnown RBP16.35■□□□□ 0.21
SKA2-205ENST00000580541 NUCB2P80303 420 aa16.35■□□□□ 0.21
SKA2-205ENST00000580541 PWP2Q15269 919 aaKnown RBP16.35■□□□□ 0.21
SKA2-205ENST00000580541 MCTP1Q6DN14 999 aa16.35■□□□□ 0.21
SKA2-205ENST00000580541 TYW1BQ6NUM6 668 aa16.35■□□□□ 0.21
SKA2-205ENST00000580541 KRT25Q7Z3Z0 450 aa16.35■□□□□ 0.21
SKA2-205ENST00000580541 DNERQ8NFT8 737 aa16.35■□□□□ 0.21
SKA2-205ENST00000580541 A1CFQ9NQ94 594 aaKnown RBP16.35■□□□□ 0.21
SKA2-205ENST00000580541 DIS3Q9Y2L1 958 aaKnown RBP16.35■□□□□ 0.21
SKA2-205ENST00000580541 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
SKA2-205ENST00000580541 VPS37CA5D8V6 355 aaPredicted RBP16.34■□□□□ 0.21
SKA2-205ENST00000580541 MEIS2O14770 477 aa16.34■□□□□ 0.21
SKA2-205ENST00000580541 PRMT2P55345 433 aa16.34■□□□□ 0.21
SKA2-205ENST00000580541 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
SKA2-205ENST00000580541 GRB14Q14449 540 aa16.34■□□□□ 0.21
SKA2-205ENST00000580541 FCHSD1Q86WN1 690 aa16.34■□□□□ 0.21
SKA2-205ENST00000580541 DIS3L2Q8IYB7 885 aaKnown RBP16.34■□□□□ 0.21
SKA2-205ENST00000580541 NSUN6Q8TEA1 469 aaKnown RBP16.34■□□□□ 0.21
SKA2-205ENST00000580541 ZSCAN16Q9H4T2 348 aaPredicted RBP16.34■□□□□ 0.21
SKA2-205ENST00000580541 ZNFX1Q9P2E3 1918 aaKnown RBP16.33■□□□□ 0.21
SKA2-205ENST00000580541 OPLAHO14841 1288 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 DTNBO60941 627 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 ADORA2AP29274 412 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 RGS2P41220 211 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.2
SKA2-205ENST00000580541 FOSBP53539 338 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 MAP2K5Q13163 448 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 ARHGEF16Q5VV41 709 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 TRMT44Q8IYL2 757 aaKnown RBP16.33■□□□□ 0.2
SKA2-205ENST00000580541 SYTL5Q8TDW5 730 aaPredicted RBP16.33■□□□□ 0.2
SKA2-205ENST00000580541 ZNF296Q8WUU4 475 aaPredicted RBP16.33■□□□□ 0.2
SKA2-205ENST00000580541 IWS1Q96ST2 819 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
SKA2-205ENST00000580541 NAP1L4Q99733 375 aaKnown RBP16.33■□□□□ 0.2
SKA2-205ENST00000580541 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.2
SKA2-205ENST00000580541 CIZ1Q9ULV3 898 aaPredicted RBP16.33■□□□□ 0.2
SKA2-205ENST00000580541 ASB14A6NK59 587 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
SKA2-205ENST00000580541 CLK2P49760 499 aaKnown RBP16.32■□□□□ 0.2
SKA2-205ENST00000580541 NONOQ15233 471 aaKnown RBP eCLIP16.32■□□□□ 0.2
SKA2-205ENST00000580541 MORN1Q5T089 497 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 BRAPQ7Z569 592 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 ZNF467Q7Z7K2 595 aaPredicted RBP16.32■□□□□ 0.2
SKA2-205ENST00000580541 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
SKA2-205ENST00000580541 TBC1D5Q92609 795 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 GJB4Q9NTQ9 266 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 PCDHA6Q9UN73 950 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 PCDHA8Q9Y5H6 950 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
SKA2-205ENST00000580541 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
SKA2-205ENST00000580541 BTBD18B2RXH4 712 aa16.31■□□□□ 0.2
SKA2-205ENST00000580541 XRCC5P13010 732 aaKnown RBP16.31■□□□□ 0.2
SKA2-205ENST00000580541 TAL1P17542 331 aaPredicted RBP16.31■□□□□ 0.2
SKA2-205ENST00000580541 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.2
SKA2-205ENST00000580541 JAKMIP3Q5VZ66 844 aa16.31■□□□□ 0.2
SKA2-205ENST00000580541 FAM133AQ8N9E0 248 aa16.31■□□□□ 0.2
SKA2-205ENST00000580541 CD99L2Q8TCZ2 262 aa16.31■□□□□ 0.2
SKA2-205ENST00000580541 TRIM47Q96LD4 638 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms