RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 CFBP00751 764 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
NDEL1-208ENST00000580237 RXRAP19793 462 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 ADCYAP1R1P41586 468 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 TNFAIP2Q03169 654 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 PIGSQ96S52 555 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 ZMYND8Q9ULU4 1186 aaPredicted RBP12.64□□□□□ -0.39
NDEL1-208ENST00000580237 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
NDEL1-208ENST00000580237 PCDHA1Q9Y5I3 950 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 DDX49Q9Y6V7 483 aaKnown RBP12.64□□□□□ -0.39
NDEL1-208ENST00000580237 LOC102724159A0A0B4J2E5 919 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 LIFRP42702 1097 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 GNAQP50148 359 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 PWP2Q15269 919 aaKnown RBP12.63□□□□□ -0.39
NDEL1-208ENST00000580237 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
NDEL1-208ENST00000580237 TLK2Q86UE8 772 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 RRP36Q96EU6 259 aaKnown RBP12.63□□□□□ -0.39
NDEL1-208ENST00000580237 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
NDEL1-208ENST00000580237 MAP3K14Q99558 947 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 AP5M1Q9H0R1 490 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 PRKAG2Q9UGJ0 569 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 TRIOBPQ9H2D6 2365 aa12.63□□□□□ -0.39
NDEL1-208ENST00000580237 LTBP2Q14767 1821 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 ADAMTS4O75173 837 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 SYN1P17600 705 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 HSPA4P34932 840 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 RTP1P59025 263 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 ARHGEF16Q5VV41 709 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 BLOC1S2Q6QNY1 142 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
NDEL1-208ENST00000580237 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 MTMR8Q96EF0 704 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 MAF1Q9H063 256 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 KATNBL1Q9H079 304 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 RIOX1Q9H6W3 641 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
NDEL1-208ENST00000580237 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-208ENST00000580237 A0A1W2PQ45 241 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-208ENST00000580237 A0A1W2PQY0 241 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 MYADML2A6NDP7 307 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 MOXD2PA6NHM9 499 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 ADCY6O43306 1168 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 CYTH3O43739 400 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 PPP1R11O60927 126 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-208ENST00000580237 PLEKHA8P1O95397 391 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 ACLYP53396 1101 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 COL9A3Q14050 684 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-208ENST00000580237 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 GNASQ5JWF2 1037 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 APOA5Q6Q788 366 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 SYTL5Q8TDW5 730 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-208ENST00000580237 MORC4Q8TE76 937 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 NSUN6Q8TEA1 469 aaKnown RBP12.61□□□□□ -0.39
NDEL1-208ENST00000580237 VTI1AQ96AJ9 217 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 GLT1D1Q96MS3 346 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 RMDN3Q96TC7 470 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 PRDM5Q9NQX1 630 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-208ENST00000580237 STARD7Q9NQZ5 370 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
NDEL1-208ENST00000580237 KLF18A0A0U1RQI7 1052 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 GOLGA8AA7E2F4 631 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 GOLGA8BA8MQT2 603 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
NDEL1-208ENST00000580237 ZBTB43O43298 467 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 ZEB2O60315 1214 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 POLR2MP0CAP2 368 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 SMPD1P17405 629 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 EIF2AK2P19525 551 aaKnown RBP12.6□□□□□ -0.39
NDEL1-208ENST00000580237 PSMA5P28066 241 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 CST5P28325 142 aaPredicted RBP12.6□□□□□ -0.39
NDEL1-208ENST00000580237 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
NDEL1-208ENST00000580237 GJA9P57773 515 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 KCNA10Q16322 511 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 RTN1Q16799 776 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 IQSEC1Q6DN90 963 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 SLC39A5Q6ZMH5 540 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 SGMS1Q86VZ5 419 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 SCFD2Q8WU76 684 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 CUL5Q93034 780 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 TSEN34Q9BSV6 310 aaKnown RBP12.6□□□□□ -0.39
NDEL1-208ENST00000580237 WDR11Q9BZH6 1224 aa12.6□□□□□ -0.39
NDEL1-208ENST00000580237 UPF3AQ9H1J1 476 aaKnown RBP12.6□□□□□ -0.39
NDEL1-208ENST00000580237 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
NDEL1-208ENST00000580237 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms