RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 SMOC2Q9H3U7 446 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 USP18Q9UMW8 372 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 ADAMTS5Q9UNA0 930 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 TRIM35Q9UPQ4 493 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 ZNF853P0CG23 659 aa7.52□□□□□ -1.21
CCDC178-209ENST00000579947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.52□□□□□ -1.21
CCDC178-209ENST00000579947 DNAAF4Q8WXU2 420 aa7.52□□□□□ -1.21
CCDC178-209ENST00000579947 RIN2Q8WYP3 895 aaPredicted RBP7.52□□□□□ -1.21
CCDC178-209ENST00000579947 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.52□□□□□ -1.21
CCDC178-209ENST00000579947 SELPP16109 830 aa7.52□□□□□ -1.21
CCDC178-209ENST00000579947 TATDN1Q6P1N9 297 aa7.52□□□□□ -1.21
CCDC178-209ENST00000579947 NFRKBQ6P4R8 1299 aa7.52□□□□□ -1.21
CCDC178-209ENST00000579947 BARX2Q9UMQ3 279 aaPredicted RBP7.52□□□□□ -1.21
CCDC178-209ENST00000579947 SCN10AQ9Y5Y9 1956 aa7.52□□□□□ -1.21
CCDC178-209ENST00000579947 NBNO60934 754 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 CTNNB1P35222 781 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 ZNF528Q3MIS6 628 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC178-209ENST00000579947 LRRC8DQ7L1W4 858 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 TEX11Q8IYF3 940 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 KIF12Q96FN5 646 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 PARD6AQ9NPB6 346 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 MCM3APO60318 1980 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 RBM25P49756 843 aaKnown RBP7.51□□□□□ -1.21
CCDC178-209ENST00000579947 ARMCX2Q7L311 632 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 PIK3R5Q8WYR1 880 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 FGD4Q96M96 766 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 ADAMTS20P59510 1910 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 FSD2A1L4K1 749 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 LDHCP07864 332 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 BMPR1AP36894 532 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 GSTO1P78417 241 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 MECOMQ03112 1051 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 ATP8B4Q8TF62 1192 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 ZNF384Q8TF68 577 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 S1PR5Q9H228 398 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 RNF216Q9NWF9 866 aaPredicted RBP7.51□□□□□ -1.21
CCDC178-209ENST00000579947 ZFYVE26Q68DK2 2539 aa7.51□□□□□ -1.21
CCDC178-209ENST00000579947 LINC00271P0C7V0 271 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 CACNB1Q02641 598 aaPredicted RBP7.5□□□□□ -1.21
CCDC178-209ENST00000579947 G2E3Q7L622 706 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 ADGRD2Q7Z7M1 963 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 ZDHHC14Q8IZN3 488 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 YME1L1Q96TA2 773 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 MTG1Q9BT17 334 aaPredicted RBP7.5□□□□□ -1.21
CCDC178-209ENST00000579947 EPC1Q9H2F5 836 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 ELL2O00472 640 aaPredicted RBP7.5□□□□□ -1.21
CCDC178-209ENST00000579947 STAT3P40763 770 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 PURAQ00577 322 aaKnown RBP7.5□□□□□ -1.21
CCDC178-209ENST00000579947 CAMK1Q14012 370 aa7.5□□□□□ -1.21
CCDC178-209ENST00000579947 SMG5Q9UPR3 1016 aaKnown RBP7.5□□□□□ -1.21
CCDC178-209ENST00000579947 DYNC1LI2O43237 492 aaPredicted RBP7.49□□□□□ -1.21
CCDC178-209ENST00000579947 FLOT1O75955 427 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 TBC1D8BQ0IIM8 1120 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 RAB3GAP1Q15042 981 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 ATF7IPQ6VMQ6 1270 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 C8orf58Q8NAV2 365 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 PLVAPQ9BX97 442 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 ERVK-5Q9HDB9 667 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 C2CD4DB7Z1M9 353 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 GRM8O00222 908 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 NOL8Q76FK4 1167 aaKnown RBP7.49□□□□□ -1.21
CCDC178-209ENST00000579947 PDZD3Q86UT5 571 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 REPS2Q8NFH8 660 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 DDX11Q96FC9 970 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 STK31Q9BXU1 1019 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 VPS13AQ96RL7 3174 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 WDR87Q6ZQQ6 2873 aa7.49□□□□□ -1.21
CCDC178-209ENST00000579947 TBC1D4O60343 1298 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 LGR5O75473 907 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 NRIP1P48552 1158 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 ABCB5Q2M3G0 1257 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 TMEFF1Q8IYR6 380 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 FIBCD1Q8N539 461 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 SH3RF3Q8TEJ3 882 aaPredicted RBP7.48□□□□□ -1.21
CCDC178-209ENST00000579947 TOP1MTQ969P6 601 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 NEK1Q96PY6 1258 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 RXFP3Q9NSD7 469 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 ZNF214Q9UL59 606 aaPredicted RBP7.48□□□□□ -1.21
CCDC178-209ENST00000579947 PCDHGA2Q9Y5H1 932 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 FLT1P17948 1338 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 TRIP12Q14669 1992 aaPredicted RBP7.48□□□□□ -1.21
CCDC178-209ENST00000579947 LRP3O75074 770 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 HLA-DOAP06340 250 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 GUCY1A2P33402 732 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 FAM47CQ5HY64 1035 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 IQSEC1Q6DN90 963 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 TMEM184AQ6ZMB5 413 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 ERICH6Q7L0X2 663 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 C1orf210Q8IVY1 113 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 MYOCDQ8IZQ8 938 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 ZCCHC14Q8WYQ9 949 aaKnown RBP7.48□□□□□ -1.21
CCDC178-209ENST00000579947 IFT57Q9NWB7 429 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 PATJQ8NI35 1801 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 KIAA1671Q9BY89 1806 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 LILRB5O75023 590 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 NAALADL2Q58DX5 795 aa7.48□□□□□ -1.21
CCDC178-209ENST00000579947 BEND3Q5T5X7 828 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms