RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 NYAP2Q9P242 653 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 SLC4A4Q9Y6R1 1079 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 SCN5AQ14524 2016 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CPT1AP50416 773 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 OAZ1P54368 228 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 IKQ13123 557 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CTR9Q6PD62 1173 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 FBXO22Q8NEZ5 403 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 OR6J1Q8NGC5 347 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 WDR11Q9BZH6 1224 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 IL1RAPL2Q9NP60 686 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 MUTYHQ9UIF7 546 aa15.78■□□□□ 0.12
CDK5RAP3-213ENST00000579605 COL4A4P53420 1690 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 GJB5O95377 273 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CHGBP05060 677 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 IRS1P35568 1242 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 PTPN5P54829 565 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 SNAP25P60880 206 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 DUSP28Q4G0W2 176 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 FAM86C1Q9NVL1 165 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 FAM50BQ9Y247 325 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 EXOC6BQ9Y2D4 811 aa15.77■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 GFRA3O60609 400 aa15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 RASA1P20936 1047 aa15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 TCTN1Q2MV58 587 aa15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 NSMFQ6X4W1 530 aa15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 ADHFE1Q8IWW8 467 aa15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 LRRC47Q8N1G4 583 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 BRWD1Q9NSI6 2320 aa15.76■□□□□ 0.11
CDK5RAP3-213ENST00000579605 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 BMP3P12645 472 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 ADD2P35612 726 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 GPNMBQ14956 572 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CLUL1Q15846 466 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PTGISQ16647 500 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PTPROQ16827 1216 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 TCEAL5Q5H9L2 206 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 MUM1L1Q5H9M0 696 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 SLFN13Q68D06 897 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 MRPL38Q96DV4 380 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CYP39A1Q9NYL5 469 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PRKAG3Q9UGI9 489 aa15.75■□□□□ 0.11
CDK5RAP3-213ENST00000579605 MINDY4BA8MYZ0 360 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CCER2I3L3R5 266 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 LRRFIP1Q32MZ4 808 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 BRDTQ58F21 947 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CNKSR3Q6P9H4 555 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CCDC155Q8N6L0 562 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 BANK1Q8NDB2 785 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CLDND1Q9NY35 253 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CTNNA3Q9UI47 895 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 USP34Q70CQ2 3546 aa15.74■□□□□ 0.11
CDK5RAP3-213ENST00000579605 SELPP16109 830 aa15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 FOXK2Q01167 660 aa15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 TKFCQ3LXA3 575 aa15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 LRRC8DQ7L1W4 858 aa15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 AFAP1L1Q8TED9 768 aa15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 COPS5Q92905 334 aa15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PBXIP1Q96AQ6 731 aa15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PABPC5Q96DU9 382 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-213ENST00000579605 ABHD14A-ACY1A0A1B0GW23 586 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 NBNO60934 754 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PRDM1O75626 825 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 FDX1P10109 184 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 STAT2P52630 851 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PTPN11Q06124 597 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 TCF15Q12870 199 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 IKBKEQ14164 716 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 ERC1Q8IUD2 1116 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 RNF135Q8IUD6 432 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 ZNF444Q8N0Y2 327 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CEP95Q96GE4 821 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 BOLA2Q9H3K6 86 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 PAG1Q9NWQ8 432 aa15.72■□□□□ 0.11
CDK5RAP3-213ENST00000579605 MYH8P13535 1937 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 GPM6BQ13491 265 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 BAATQ14032 418 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 EPC2Q52LR7 807 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 TIGD5Q53EQ6 642 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 HERC4Q5GLZ8 1057 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 GDF6Q6KF10 455 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.71■□□□□ 0.112e-13■■■■□ 22.1
CDK5RAP3-213ENST00000579605 SUGP1Q8IWZ8 645 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CAGE1Q8TC20 777 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 CHURC1Q8WUH1 139 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 EDAQ92838 391 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 MKL1Q969V6 931 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 ARPP21Q9UBL0 812 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 INSL6Q9Y581 213 aa15.71■□□□□ 0.11
CDK5RAP3-213ENST00000579605 ZBED9Q6R2W3 1325 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 RAD50Q92878 1312 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 IGKV6D-41A0A0C4DH26 115 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 TMEM221A6NGB7 291 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 M0R296 226 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 KPNA6O60684 536 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms