RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 TNKSO95271 1327 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 COL6A3P12111 3177 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CABYRO75952 493 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 SNHG28P0DPA3 235 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CSF2RAP15509 400 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 RPS6P62753 249 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ITGA7Q13683 1181 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CCDC178Q5BJE1 867 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 MFSD5Q6N075 450 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TMEM199Q8N511 208 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 OR6J1Q8NGC5 347 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CLEC4DQ8WXI8 215 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.78□□□□□ -0.686e-26■■□□□ 13.2
CDK5RAP3-211ENST00000578996 UBAC1Q9BSL1 405 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PNMA2Q9UL42 364 aa10.78□□□□□ -0.68
CDK5RAP3-211ENST00000578996 DLL1O00548 723 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MYL3P08590 195 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ACRP10323 421 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 GSPT1P15170 499 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PDE4AP27815 886 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CYP2C18P33260 490 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PPIGQ13427 754 aaKnown RBP eCLIP10.77□□□□□ -0.692e-11■■■■■ 30.2
CDK5RAP3-211ENST00000578996 PPP2R5BQ15173 497 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 DUSP28Q4G0W2 176 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 IFIT1BQ5T764 474 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ADGRF4Q8IZF3 695 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ENAHQ8N8S7 591 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MORC4Q8TE76 937 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CDX2Q99626 313 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 KRT23Q9C075 422 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 IL25Q9H293 177 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SEMA6BQ9H3T3 888 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 HIPK3Q9H422 1215 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CNNM2Q9H8M5 875 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 GPHNQ9NQX3 736 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ZSWIM5Q9P217 1185 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 Q9Y3F1 56 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 WDR19Q8NEZ3 1342 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 LAMA4Q16363 1823 aa10.77□□□□□ -0.69
CDK5RAP3-211ENST00000578996 LAMA2P24043 3122 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 B4DLN1 442 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 B4GALT4O60513 344 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CD4P01730 458 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PARP1P09874 1014 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NT5C2P49902 561 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CPT1AP50416 773 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MRPL12P52815 198 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CCL23P55773 120 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CHMP4BP1P59074 171 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NKX3-2P78367 333 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TRDNQ13061 729 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ASPRV1Q53RT3 343 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TTC22Q5TAA0 569 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MYLIPQ8WY64 445 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TRPV6Q9H1D0 765 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TTYH1Q9H313 450 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ABCB11O95342 1321 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 UMODL1Q5DID0 1318 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 RAD50Q92878 1312 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 LCTP09848 1927 aa10.76□□□□□ -0.69
CDK5RAP3-211ENST00000578996 LOC102724159A0A0B4J2E5 919 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TXNP10599 105 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 FOSL2P15408 326 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 DNAJB2P25686 324 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PWP2Q15269 919 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 QRICH1Q2TAL8 776 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 BRDTQ58F21 947 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 FAM47CQ5HY64 1035 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TMEM240Q5SV17 173 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PSRC1Q6PGN9 363 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ZNF365Q70YC5 407 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 FBXO11Q86XK2 927 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SLC43A3Q8NBI5 491 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 DNERQ8NFT8 737 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PPP1R13LQ8WUF5 828 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 RUFY2Q8WXA3 655 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 COPS5Q92905 334 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 GRIN2DO15399 1336 aa10.75□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CFBP00751 764 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PURAQ00577 322 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TTLL4Q14679 1199 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SEPT14Q6ZU15 432 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CYB5R4Q7L1T6 521 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 C16orf59Q7L2K0 433 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 HOMER1Q86YM7 354 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MCF2L2Q86YR7 1114 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 STAG2Q8N3U4 1231 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MAFAQ8NHW3 353 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SCFD2Q8WU76 684 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TIFAQ96CG3 184 aa10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TAAR1Q96RJ0 339 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms