RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 PRKAR2AP13861 404 aaKnown RBP17.77■□□□□ 0.44
IFT20-208ENST00000578985 IFNAR1P17181 557 aa17.77■□□□□ 0.44
IFT20-208ENST00000578985 CACNB2Q08289 660 aaPredicted RBP17.77■□□□□ 0.44
IFT20-208ENST00000578985 NTRK3Q16288 839 aa17.77■□□□□ 0.44
IFT20-208ENST00000578985 HEATR3Q7Z4Q2 680 aa17.77■□□□□ 0.44
IFT20-208ENST00000578985 MSL3Q8N5Y2 521 aaKnown RBP17.77■□□□□ 0.44
IFT20-208ENST00000578985 TINF2Q9BSI4 451 aa17.77■□□□□ 0.44
IFT20-208ENST00000578985 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
IFT20-208ENST00000578985 CPLX1O14810 134 aa17.76■□□□□ 0.43
IFT20-208ENST00000578985 PRPF3O43395 683 aaKnown RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 CFBP00751 764 aa17.76■□□□□ 0.43
IFT20-208ENST00000578985 AKAP17AQ02040 695 aaKnown RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 MAP3K21Q5TCX8 1036 aa17.76■□□□□ 0.43
IFT20-208ENST00000578985 CPLX2Q6PUV4 134 aaKnown RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 MAMDC4Q6UXC1 1216 aa17.76■□□□□ 0.43
IFT20-208ENST00000578985 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
IFT20-208ENST00000578985 PHKBQ93100 1093 aa17.76■□□□□ 0.43
IFT20-208ENST00000578985 PURBQ96QR8 312 aaKnown RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 HMX1Q9NP08 348 aaPredicted RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 KIAA0100Q14667 2235 aaKnown RBP17.76■□□□□ 0.43
IFT20-208ENST00000578985 RPTORQ8N122 1335 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 SYNGAP1Q96PV0 1343 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 ASB14A6NK59 587 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 HSD17B4P51659 736 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 SCRN1Q12765 414 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 ME3Q16798 604 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 WWC2Q6AWC2 1192 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 SYTL5Q8TDW5 730 aaPredicted RBP17.75■□□□□ 0.43
IFT20-208ENST00000578985 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
IFT20-208ENST00000578985 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 RNF26Q9BY78 433 aaPredicted RBP17.75■□□□□ 0.43
IFT20-208ENST00000578985 RNF208Q9H0X6 261 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 LIMCH1Q9UPQ0 1083 aa17.75■□□□□ 0.43
IFT20-208ENST00000578985 ASTN1O14525 1302 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
IFT20-208ENST00000578985 PPFIA3O75145 1194 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 LARGE1O95461 756 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 SCG2P13521 617 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 GHRHRQ02643 423 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 SSRP1Q08945 709 aaKnown RBP17.74■□□□□ 0.43
IFT20-208ENST00000578985 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
IFT20-208ENST00000578985 PRAMEF19Q5SWL8 479 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 TRPV1Q8NER1 839 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
IFT20-208ENST00000578985 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.43
IFT20-208ENST00000578985 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.74■□□□□ 0.43
IFT20-208ENST00000578985 MAP3K20Q9NYL2 800 aaKnown RBP17.74■□□□□ 0.43
IFT20-208ENST00000578985 hCG_1984214I3L0E3 225 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 SNAI1O95863 264 aaPredicted RBP17.73■□□□□ 0.43
IFT20-208ENST00000578985 CYBAP13498 195 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 CCND3P30281 292 aaPredicted RBP17.73■□□□□ 0.43
IFT20-208ENST00000578985 HOXA13P31271 388 aaPredicted RBP17.73■□□□□ 0.43
IFT20-208ENST00000578985 ALDH5A1P51649 535 aaPredicted RBP17.73■□□□□ 0.43
IFT20-208ENST00000578985 ARMCX2Q7L311 632 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 ZNF713Q8N859 430 aaPredicted RBP17.73■□□□□ 0.43
IFT20-208ENST00000578985 DNERQ8NFT8 737 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 TAAR1Q96RJ0 339 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 COL20A1Q9P218 1284 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 NRBP1Q9UHY1 535 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
IFT20-208ENST00000578985 LOC102724159A0A0B4J2E5 919 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 STXBP3O00186 592 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 ST18O60284 1047 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 CDKL5O76039 1030 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 GJB1P08034 283 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 CNGA1P29973 690 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 NAPAP54920 295 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 PWP2Q15269 919 aaKnown RBP17.72■□□□□ 0.43
IFT20-208ENST00000578985 PKN1Q16512 942 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 PPP1R18Q6NYC8 613 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 CUL5Q93034 780 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
IFT20-208ENST00000578985 PSTPIP2Q9H939 334 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 PAK6Q9NQU5 681 aaPredicted RBP17.72■□□□□ 0.43
IFT20-208ENST00000578985 BARHL2Q9NY43 387 aa17.72■□□□□ 0.43
IFT20-208ENST00000578985 B4DLN1 442 aa17.71■□□□□ 0.43
IFT20-208ENST00000578985 MRPL12P52815 198 aaKnown RBP17.71■□□□□ 0.43
IFT20-208ENST00000578985 TYW1BQ6NUM6 668 aa17.71■□□□□ 0.43
IFT20-208ENST00000578985 FCHSD1Q86WN1 690 aa17.71■□□□□ 0.43
IFT20-208ENST00000578985 MORC4Q8TE76 937 aa17.71■□□□□ 0.43
IFT20-208ENST00000578985 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
IFT20-208ENST00000578985 DEFB118Q96PH6 123 aa17.71■□□□□ 0.43
IFT20-208ENST00000578985 RMDN3Q96TC7 470 aa17.71■□□□□ 0.43
IFT20-208ENST00000578985 MPHOSPH6Q99547 160 aaKnown RBP17.71■□□□□ 0.43
IFT20-208ENST00000578985 ABHD16BQ9H3Z7 469 aa17.71■□□□□ 0.43
IFT20-208ENST00000578985 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
IFT20-208ENST00000578985 LRRC37A2A6NM11 1700 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 POTEFA5A3E0 1075 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 CTDNEP1O95476 244 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 ZNF865P0CJ78 1059 aaPredicted RBP17.7■□□□□ 0.42
IFT20-208ENST00000578985 SOX10P56693 466 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 ACVR2BQ13705 512 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms