RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 PLEKHA8P1O95397 391 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 COL6A1P12109 1028 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 CPA1P15085 419 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 RXRAP19793 462 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 RPS6KB1P23443 525 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 CALML3P27482 149 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 PSMA5P28066 241 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 TMTC3Q6ZXV5 915 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 HOMER1Q86YM7 354 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 FANCBQ8NB91 859 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 DNERQ8NFT8 737 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 AGXT2Q9BYV1 514 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 C11orf49Q9H6J7 331 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 BRPF3Q9ULD4 1205 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 NID2Q14112 1375 aa16.77■□□□□ 0.27
MKS1-207ENST00000578789 DNM1LO00429 736 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 RARBP10826 455 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
MKS1-207ENST00000578789 EDNRBP24530 442 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 ANO1Q5XXA6 986 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 SYNE3Q6ZMZ3 975 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 RAB11FIP4Q86YS3 637 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 SRBD1Q8N5C6 995 aaKnown RBP16.76■□□□□ 0.27
MKS1-207ENST00000578789 SAMD3Q8N6K7 520 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 HTATIP2Q9BUP3 242 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 RBM28Q9NW13 759 aaKnown RBP16.76■□□□□ 0.27
MKS1-207ENST00000578789 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 PCDHA1Q9Y5I3 950 aa16.76■□□□□ 0.27
MKS1-207ENST00000578789 KLF18A0A0U1RQI7 1052 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 ZBTB43O43298 467 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
MKS1-207ENST00000578789 HSD17B4P51659 736 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 Q6ZUG5 572 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 ARRDC4Q8NCT1 418 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 SYTL5Q8TDW5 730 aaPredicted RBP16.75■□□□□ 0.27
MKS1-207ENST00000578789 TBC1D5Q92609 795 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 RRP36Q96EU6 259 aaKnown RBP16.75■□□□□ 0.27
MKS1-207ENST00000578789 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 ZSWIM6Q9HCJ5 1215 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 VTA1Q9NP79 307 aa16.75■□□□□ 0.27
MKS1-207ENST00000578789 MAP3K20Q9NYL2 800 aaKnown RBP16.75■□□□□ 0.27
MKS1-207ENST00000578789 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
MKS1-207ENST00000578789 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
MKS1-207ENST00000578789 DUSP11O75319 330 aaKnown RBP16.74■□□□□ 0.27
MKS1-207ENST00000578789 LRRC41Q15345 812 aa16.74■□□□□ 0.27
MKS1-207ENST00000578789 RTN1Q16799 776 aa16.74■□□□□ 0.27
MKS1-207ENST00000578789 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
MKS1-207ENST00000578789 LENG1Q96BZ8 264 aaPredicted RBP16.74■□□□□ 0.27
MKS1-207ENST00000578789 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
MKS1-207ENST00000578789 XPNPEP3Q9NQH7 507 aa16.74■□□□□ 0.27
MKS1-207ENST00000578789 COL20A1Q9P218 1284 aa16.74■□□□□ 0.27
MKS1-207ENST00000578789 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
MKS1-207ENST00000578789 ADCY6O43306 1168 aa16.73■□□□□ 0.27
MKS1-207ENST00000578789 ADAMTS4O75173 837 aa16.73■□□□□ 0.27
MKS1-207ENST00000578789 FGD1P98174 961 aa16.73■□□□□ 0.27
MKS1-207ENST00000578789 TAPT1Q6NXT6 567 aa16.73■□□□□ 0.27
MKS1-207ENST00000578789 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
MKS1-207ENST00000578789 FBXO16Q8IX29 292 aaPredicted RBP16.73■□□□□ 0.27
MKS1-207ENST00000578789 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
MKS1-207ENST00000578789 BRF1Q92994 677 aa16.73■□□□□ 0.27
MKS1-207ENST00000578789 IL17RAQ96F46 866 aa16.73■□□□□ 0.27
MKS1-207ENST00000578789 SEC63Q9UGP8 760 aaKnown RBP16.73■□□□□ 0.27
MKS1-207ENST00000578789 SYNRGQ9UMZ2 1314 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 GOLGA8BA8MQT2 603 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 B4DLN1 442 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 KBTBD13C9JR72 458 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 CFBP00751 764 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 MRPL12P52815 198 aaKnown RBP16.72■□□□□ 0.27
MKS1-207ENST00000578789 EVCP57679 992 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 ANAPC15P60006 121 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 NKX3-2P78367 333 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 FUT2Q10981 343 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 GJC2Q5T442 439 aaPredicted RBP16.72■□□□□ 0.27
MKS1-207ENST00000578789 PRPF38BQ5VTL8 546 aaKnown RBP16.72■□□□□ 0.27
MKS1-207ENST00000578789 PIBF1Q8WXW3 757 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 UPF3AQ9H1J1 476 aaKnown RBP16.72■□□□□ 0.27
MKS1-207ENST00000578789 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
MKS1-207ENST00000578789 KIAA1217Q5T5P2 1943 aa16.72■□□□□ 0.27
MKS1-207ENST00000578789 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.71■□□□□ 0.27
MKS1-207ENST00000578789 RBM47A0AV96 593 aaKnown RBP16.71■□□□□ 0.27
MKS1-207ENST00000578789 PGK1P00558 417 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 CST5P28325 142 aaPredicted RBP16.71■□□□□ 0.27
MKS1-207ENST00000578789 CDC27P30260 824 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 ADCYAP1R1P41586 468 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 GJA9P57773 515 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 EEPD1Q7L9B9 569 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 RNF180Q86T96 592 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 KLHDC9Q8NEP7 349 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 NSUN6Q8TEA1 469 aaKnown RBP16.71■□□□□ 0.27
MKS1-207ENST00000578789 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 PHF24Q9UPV7 400 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 GNEQ9Y223 722 aaKnown RBP16.71■□□□□ 0.27
MKS1-207ENST00000578789 CYP46A1Q9Y6A2 500 aa16.71■□□□□ 0.27
MKS1-207ENST00000578789 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
MKS1-207ENST00000578789 POLR2MP0CAP2 368 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms