RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 Q7L0L9 218 aa18.58■□□□□ 0.57
CRLF3-203ENST00000578692 UBAC1Q9BSL1 405 aa18.58■□□□□ 0.57
CRLF3-203ENST00000578692 RPS6P62753 249 aaKnown RBP18.57■□□□□ 0.56
CRLF3-203ENST00000578692 FSCN1Q16658 493 aaKnown RBP18.57■□□□□ 0.56
CRLF3-203ENST00000578692 USH1GQ495M9 461 aa18.57■□□□□ 0.56
CRLF3-203ENST00000578692 ASPRV1Q53RT3 343 aa18.57■□□□□ 0.56
CRLF3-203ENST00000578692 TMEM63BQ5T3F8 832 aa18.57■□□□□ 0.56
CRLF3-203ENST00000578692 SLC30A10Q6XR72 485 aa18.57■□□□□ 0.56
CRLF3-203ENST00000578692 ADGRF4Q8IZF3 695 aa18.57■□□□□ 0.56
CRLF3-203ENST00000578692 ZEB2O60315 1214 aa18.56■□□□□ 0.56
CRLF3-203ENST00000578692 CABYRO75952 493 aa18.56■□□□□ 0.56
CRLF3-203ENST00000578692 PARP1P09874 1014 aaKnown RBP18.56■□□□□ 0.56
CRLF3-203ENST00000578692 PTGS1P23219 599 aa18.56■□□□□ 0.56
CRLF3-203ENST00000578692 IFIT1BQ5T764 474 aaKnown RBP18.56■□□□□ 0.56
CRLF3-203ENST00000578692 CXCL17Q6UXB2 119 aa18.56■□□□□ 0.56
CRLF3-203ENST00000578692 RGS22Q8NE09 1264 aa18.56■□□□□ 0.56
CRLF3-203ENST00000578692 DNERQ8NFT8 737 aa18.56■□□□□ 0.56
CRLF3-203ENST00000578692 MPHOSPH6Q99547 160 aaKnown RBP18.56■□□□□ 0.56
CRLF3-203ENST00000578692 MTMR10Q9NXD2 777 aa18.56■□□□□ 0.56
CRLF3-203ENST00000578692 TIMP1P01033 207 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 PTH1RQ03431 593 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 TRDNQ13061 729 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
CRLF3-203ENST00000578692 DUSP28Q4G0W2 176 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 CYB5R4Q7L1T6 521 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 WDR11Q9BZH6 1224 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 VAT1LQ9HCJ6 419 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
CRLF3-203ENST00000578692 LRRC37A2A6NM11 1700 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 RBM47A0AV96 593 aaKnown RBP18.55■□□□□ 0.56
CRLF3-203ENST00000578692 B4DLN1 442 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 TLR3O15455 904 aaKnown RBP18.55■□□□□ 0.56
CRLF3-203ENST00000578692 DHX16O60231 1041 aaKnown RBP18.55■□□□□ 0.56
CRLF3-203ENST00000578692 CYP21A2P08686 494 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 MRPL12P52815 198 aaKnown RBP18.55■□□□□ 0.56
CRLF3-203ENST00000578692 FPGSQ05932 587 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 PDE4DQ08499 809 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 SEC23AQ15436 765 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 FAM109BQ6ICB4 259 aaPredicted RBP18.55■□□□□ 0.56
CRLF3-203ENST00000578692 MAF1Q9H063 256 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 TBX21Q9UL17 535 aa18.55■□□□□ 0.56
CRLF3-203ENST00000578692 ABCB11O95342 1321 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 SGSM2O43147 1006 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 EPHB4P54760 987 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 ITGA7Q13683 1181 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 QRICH1Q2TAL8 776 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 FAM126BQ8IXS8 530 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 SLC43A3Q8NBI5 491 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 JMJD4Q9H9V9 463 aa18.54■□□□□ 0.56
CRLF3-203ENST00000578692 EDNRBP24530 442 aa18.53■□□□□ 0.56
CRLF3-203ENST00000578692 MFSD5Q6N075 450 aa18.53■□□□□ 0.56
CRLF3-203ENST00000578692 FBXO11Q86XK2 927 aa18.53■□□□□ 0.56
CRLF3-203ENST00000578692 STAG2Q8N3U4 1231 aa18.53■□□□□ 0.56
CRLF3-203ENST00000578692 SEZ6LQ9BYH1 1024 aa18.53■□□□□ 0.56
CRLF3-203ENST00000578692 KLRF2D3W0D1 207 aa18.52■□□□□ 0.55
CRLF3-203ENST00000578692 CD4P01730 458 aa18.52■□□□□ 0.55
CRLF3-203ENST00000578692 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.55
CRLF3-203ENST00000578692 MRPL11Q9Y3B7 192 aaKnown RBP18.52■□□□□ 0.55
CRLF3-203ENST00000578692 GRIN2DO15399 1336 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 ERICH2A1L162 156 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 E7EWF7 191 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 IFIT3O14879 490 aaKnown RBP18.51■□□□□ 0.55
CRLF3-203ENST00000578692 NKRFO15226 690 aaKnown RBP eCLIP18.51■□□□□ 0.55
CRLF3-203ENST00000578692 RALYLQ86SE5 291 aaKnown RBP18.51■□□□□ 0.55
CRLF3-203ENST00000578692 NCOA7Q8NI08 942 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 SYTL5Q8TDW5 730 aaPredicted RBP18.51■□□□□ 0.55
CRLF3-203ENST00000578692 SCFD2Q8WU76 684 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 MAP4K1Q92918 833 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 RNPC3Q96LT9 517 aaKnown RBP18.51■□□□□ 0.55
CRLF3-203ENST00000578692 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 POLR3EQ9NVU0 708 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 MAD2L2Q9UI95 211 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 STXBP5LQ9Y2K9 1186 aa18.51■□□□□ 0.55
CRLF3-203ENST00000578692 CPT1AP50416 773 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 PSMC6P62333 389 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 SMAD3P84022 425 aaKnown RBP18.5■□□□□ 0.55
CRLF3-203ENST00000578692 PPP2R5BQ15173 497 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 ZNF697Q5TEC3 545 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 TMEM199Q8N511 208 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 OR6J1Q8NGC5 347 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 NSUN6Q8TEA1 469 aaKnown RBP18.5■□□□□ 0.55
CRLF3-203ENST00000578692 FAM161BQ96MY7 647 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 AMNQ9BXJ7 453 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 PPP1R12CQ9BZL4 782 aa18.5■□□□□ 0.55
CRLF3-203ENST00000578692 MYH6P13533 1939 aa18.49■□□□□ 0.55
CRLF3-203ENST00000578692 PALM3A6NDB9 673 aaPredicted RBP18.49■□□□□ 0.55
CRLF3-203ENST00000578692 TXNP10599 105 aaKnown RBP18.49■□□□□ 0.55
CRLF3-203ENST00000578692 PPIGQ13427 754 aaKnown RBP eCLIP18.49■□□□□ 0.55
CRLF3-203ENST00000578692 BRDTQ58F21 947 aaPredicted RBP18.49■□□□□ 0.55
CRLF3-203ENST00000578692 GPHNQ9NQX3 736 aaPredicted RBP18.49■□□□□ 0.55
CRLF3-203ENST00000578692 COL20A1Q9P218 1284 aa18.49■□□□□ 0.55
CRLF3-203ENST00000578692 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
CRLF3-203ENST00000578692 ZBTB5O15062 677 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 MYL3P08590 195 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 CSF2RAP15509 400 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 PURAQ00577 322 aaKnown RBP18.48■□□□□ 0.55
CRLF3-203ENST00000578692 TTLL4Q14679 1199 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 WTAPQ15007 396 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 SART3Q15020 963 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms