RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 PWP2Q15269 919 aaKnown RBP13.3□□□□□ -0.28
ERBB2-208ENST00000578630 MTFR1Q15390 333 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 MAMDC4Q6UXC1 1216 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 TPCN1Q9ULQ1 816 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 LIMCH1Q9UPQ0 1083 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 CNPY2Q9Y2B0 182 aa13.3□□□□□ -0.28
ERBB2-208ENST00000578630 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 hCG_1984214I3L0E3 225 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 PFKFB2O60825 505 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 CNGA1P29973 690 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 TRIM32Q13049 653 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 ZNF713Q8N859 430 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-208ENST00000578630 SYTL5Q8TDW5 730 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-208ENST00000578630 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
ERBB2-208ENST00000578630 TBC1D5Q92609 795 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 ZSCAN31Q96LW9 406 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-208ENST00000578630 TBC1D32Q96NH3 1257 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 KIF2CQ99661 725 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 RNF26Q9BY78 433 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-208ENST00000578630 GLT8D2Q9H1C3 349 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 UNC93B1Q9H1C4 597 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 PSTPIP2Q9H939 334 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
ERBB2-208ENST00000578630 SYNGAP1Q96PV0 1343 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 NID2Q14112 1375 aa13.29□□□□□ -0.28
ERBB2-208ENST00000578630 ZNFX1Q9P2E3 1918 aaKnown RBP13.29□□□□□ -0.28
ERBB2-208ENST00000578630 MSCO60682 206 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 IGHA2P01877 340 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 GJB1P08034 283 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 NTRK3Q16288 839 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 PFKFB3Q16875 520 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-208ENST00000578630 PRAMEF19Q5SWL8 479 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 ARHGEF16Q5VV41 709 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
ERBB2-208ENST00000578630 TEX2Q8IWB9 1127 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-208ENST00000578630 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.28
ERBB2-208ENST00000578630 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-208ENST00000578630 CNTNAP5Q8WYK1 1306 aa13.28□□□□□ -0.28
ERBB2-208ENST00000578630 SGPL1O95470 568 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 SNAI1O95863 264 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-208ENST00000578630 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.29
ERBB2-208ENST00000578630 SCG2P13521 617 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 MCM2P49736 904 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 ALDH5A1P51649 535 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-208ENST00000578630 HSD17B4P51659 736 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 NAPAP54920 295 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 GHRHRQ02643 423 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 SCRN1Q12765 414 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 ACVR2BQ13705 512 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 ME3Q16798 604 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 SLC30A10Q6XR72 485 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 ARMCX2Q7L311 632 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 PHKBQ93100 1093 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 IWS1Q96ST2 819 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 RMDN3Q96TC7 470 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 BARHL2Q9NY43 387 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 SMCHD1A6NHR9 2005 aa13.27□□□□□ -0.29
ERBB2-208ENST00000578630 SMCO2A6NFE2 343 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 PIK3CDO00329 1044 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 OPLAHO14841 1288 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 SEPT4O43236 478 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 DEXIO95424 95 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-208ENST00000578630 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-208ENST00000578630 GJA8P48165 433 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 PDE4DQ08499 809 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 PPP1R18Q6NYC8 613 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 FCHSD1Q86WN1 690 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 GPKOWQ92917 476 aaPredicted RBP eCLIP13.26□□□□□ -0.29
ERBB2-208ENST00000578630 DEFB118Q96PH6 123 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 PURBQ96QR8 312 aaKnown RBP13.26□□□□□ -0.29
ERBB2-208ENST00000578630 PAK6Q9NQU5 681 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-208ENST00000578630 SH2B1Q9NRF2 756 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-208ENST00000578630 FAM184BQ9ULE4 1060 aa13.26□□□□□ -0.29
ERBB2-208ENST00000578630 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 CAPN15O75808 1086 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 CYBAP13498 195 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 AKR1A1P14550 325 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 XBP1P17861 261 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 GNA11P29992 359 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 STXBP2Q15833 593 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 PKN1Q16512 942 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 WWC2Q6AWC2 1192 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 IQSEC1Q6DN90 963 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 NECAB1Q8N987 351 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
ERBB2-208ENST00000578630 WASF1Q92558 559 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms