RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SHISA4Q96DD7 197 aa25.12■■□□□ 1.61
CDC42EP4-203ENST00000578516 BACH2Q9BYV9 841 aa25.12■■□□□ 1.61
CDC42EP4-203ENST00000578516 SNAI1O95863 264 aaPredicted RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 CFBP00751 764 aa25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 HOXA13P31271 388 aaPredicted RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 RCAN1P53805 252 aa25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 TYW1BQ6NUM6 668 aa25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 TRMT44Q8IYL2 757 aaKnown RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 LENG1Q96BZ8 264 aaPredicted RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 DEFB118Q96PH6 123 aa25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 TINF2Q9BSI4 451 aa25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 SLC5A4Q9NY91 659 aa25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 SEC63Q9UGP8 760 aaKnown RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 DIS3Q9Y2L1 958 aaKnown RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 MRPL11Q9Y3B7 192 aaKnown RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 V9GY48 417 aaPredicted RBP25.11■■□□□ 1.61
CDC42EP4-203ENST00000578516 EN2P19622 333 aaPredicted RBP25.1■■□□□ 1.61
CDC42EP4-203ENST00000578516 SMARCA1P28370 1054 aa25.1■■□□□ 1.61
CDC42EP4-203ENST00000578516 NTRK3Q16288 839 aa25.1■■□□□ 1.61
CDC42EP4-203ENST00000578516 WWC2Q6AWC2 1192 aa25.1■■□□□ 1.61
CDC42EP4-203ENST00000578516 ARMCX2Q7L311 632 aa25.1■■□□□ 1.61
CDC42EP4-203ENST00000578516 HEATR3Q7Z4Q2 680 aa25.1■■□□□ 1.61
CDC42EP4-203ENST00000578516 SYTL5Q8TDW5 730 aaPredicted RBP25.1■■□□□ 1.61
CDC42EP4-203ENST00000578516 PTGS1P23219 599 aa25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 CNGA1P29973 690 aa25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 ALDH5A1P51649 535 aaPredicted RBP25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 SCRN1Q12765 414 aa25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 NECAB1Q8N987 351 aa25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 TAAR1Q96RJ0 339 aa25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 HMX1Q9NP08 348 aaPredicted RBP25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 PAK6Q9NQU5 681 aaPredicted RBP25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 PNMA2Q9UL42 364 aa25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 RPTORQ8N122 1335 aa25.09■■□□□ 1.61
CDC42EP4-203ENST00000578516 ST3GAL1Q11201 340 aa25.08■■□□□ 1.61
CDC42EP4-203ENST00000578516 EEPD1Q7L9B9 569 aa25.08■■□□□ 1.61
CDC42EP4-203ENST00000578516 ZNF274Q96GC6 653 aaPredicted RBP25.08■■□□□ 1.61
CDC42EP4-203ENST00000578516 TBC1D32Q96NH3 1257 aa25.08■■□□□ 1.61
CDC42EP4-203ENST00000578516 KIAA1217Q5T5P2 1943 aa25.08■■□□□ 1.6
CDC42EP4-203ENST00000578516 ME3Q16798 604 aa25.07■■□□□ 1.6
CDC42EP4-203ENST00000578516 ZNF467Q7Z7K2 595 aaPredicted RBP25.07■■□□□ 1.6
CDC42EP4-203ENST00000578516 TMEM106CQ9BVX2 250 aa25.07■■□□□ 1.6
CDC42EP4-203ENST00000578516 SLC26A6Q9BXS9 759 aa25.07■■□□□ 1.6
CDC42EP4-203ENST00000578516 ALDH8A1Q9H2A2 487 aaPredicted RBP25.07■■□□□ 1.6
CDC42EP4-203ENST00000578516 ZHX1Q9UKY1 873 aaPredicted RBP25.07■■□□□ 1.6
CDC42EP4-203ENST00000578516 ADAMTS3O15072 1205 aa25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 ADCY6O43306 1168 aa25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 ZNF865P0CJ78 1059 aaPredicted RBP25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 HSD17B4P51659 736 aa25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 PKN1Q16512 942 aa25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 MAMDC4Q6UXC1 1216 aa25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 FBXO16Q8IX29 292 aaPredicted RBP25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 U2AF1L4Q8WU68 220 aaKnown RBP25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 KATNBL1Q9H079 304 aa25.06■■□□□ 1.6
CDC42EP4-203ENST00000578516 STXBP3O00186 592 aa25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 GJB1P08034 283 aa25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 UBE2SQ16763 222 aa25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 FCHSD1Q86WN1 690 aa25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 ZFP91Q96JP5 570 aaPredicted RBP25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 SLKQ9H2G2 1235 aaPredicted RBP25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 UPF2Q9HAU5 1272 aaKnown RBP25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 SYNGAP1Q96PV0 1343 aa25.05■■□□□ 1.6
CDC42EP4-203ENST00000578516 CCDC196A0A1B0GTZ2 297 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 PFKFB2O60825 505 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 CD2BP2O95400 341 aaKnown RBP25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 EIF2AK2P19525 551 aaKnown RBP25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 TMEM63BQ5T3F8 832 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 USP17L6PQ6QN14 398 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 MCF2L2Q86YR7 1114 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 IL31RAQ8NI17 732 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 AIFM3Q96NN9 605 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 DOCK5Q9H7D0 1870 aa25.04■■□□□ 1.6
CDC42EP4-203ENST00000578516 CTDNEP1O95476 244 aa25.03■■□□□ 1.6
CDC42EP4-203ENST00000578516 IFNAR1P17181 557 aa25.03■■□□□ 1.6
CDC42EP4-203ENST00000578516 GHRHRQ02643 423 aa25.03■■□□□ 1.6
CDC42EP4-203ENST00000578516 RGS22Q8NE09 1264 aa25.03■■□□□ 1.6
CDC42EP4-203ENST00000578516 PDGFCQ9NRA1 345 aa25.03■■□□□ 1.6
CDC42EP4-203ENST00000578516 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 GJA8P48165 433 aa25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 NAPAP54920 295 aa25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 IRX5P78411 483 aaPredicted RBP25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 ANKRD1Q15327 319 aa25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 PFKFB3Q16875 520 aaPredicted RBP25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 LHX8Q68G74 356 aa25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 DDX20Q9UHI6 824 aaKnown RBP25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 CNPY2Q9Y2B0 182 aa25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 ALPK3Q96L96 1907 aa25.02■■□□□ 1.6
CDC42EP4-203ENST00000578516 GCOM1H8Y6P7 765 aaPredicted RBP25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 PRPF3O43395 683 aaKnown RBP25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 SGPL1O95470 568 aa25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 POLR2MP0CAP2 368 aa25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 SCG2P13521 617 aa25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 ACVR2BQ13705 512 aa25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 PPP2R5BQ15173 497 aa25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 GJC2Q5T442 439 aaPredicted RBP25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 MSL3Q8N5Y2 521 aaKnown RBP25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 DIS3LQ8TF46 1054 aaKnown RBP25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 PGBD1Q96JS3 809 aa25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 RMDN3Q96TC7 470 aa25.01■■□□□ 1.59
CDC42EP4-203ENST00000578516 PXMP2Q9NR77 195 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms