RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 KIF5BP33176 963 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 HSPA4P34932 840 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 RPS6P62753 249 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 TRAF1Q13077 416 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 COL9A3Q14050 684 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 LRRC26Q2I0M4 334 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 USH1GQ495M9 461 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 SGMS1Q86VZ5 419 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 FBXO11Q86XK2 927 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 MCF2L2Q86YR7 1114 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 FAM161BQ96MY7 647 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 AMNQ9BXJ7 453 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 GPHNQ9NQX3 736 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 PRKAG2Q9UGJ0 569 aa15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 MRPL11Q9Y3B7 192 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-208ENST00000578501 CCDC69A6NI79 296 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 CYTH3O43739 400 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 DUSP11O75319 330 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 GNAQP50148 359 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 EXOSC10Q01780 885 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 LRRC41Q15345 812 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 CCDC144BQ3MJ40 725 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 ANO1Q5XXA6 986 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 NFXL1Q6ZNB6 911 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 DNERQ8NFT8 737 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 CTCFLQ8NI51 663 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 LZTS2Q9BRK4 669 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 XPNPEP3Q9NQH7 507 aa15.85■□□□□ 0.13
CSNK1D-208ENST00000578501 KBTBD13C9JR72 458 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 ALDH5A1P51649 535 aaPredicted RBP15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 SLC35G1Q2M3R5 365 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 ADCK5Q3MIX3 580 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 GJC2Q5T442 439 aaPredicted RBP15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 SLC30A10Q6XR72 485 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 RNF180Q86T96 592 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 SAMD3Q8N6K7 520 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 MAFAQ8NHW3 353 aaPredicted RBP15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 NUP133Q8WUM0 1156 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 PURBQ96QR8 312 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 MPHOSPH6Q99547 160 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 SPZ1Q9BXG8 430 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 MAP3K20Q9NYL2 800 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 SLC12A7Q9Y666 1083 aa15.84■□□□□ 0.13
CSNK1D-208ENST00000578501 PNMA6FA0A0J9YX94 578 aa15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 B4DLN1 442 aa15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 ADAMTS4O75173 837 aa15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 CALML3P27482 149 aa15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 MRPL12P52815 198 aaKnown RBP15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 NKX3-2P78367 333 aa15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 GHRHRQ02643 423 aa15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 CDX2Q99626 313 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 TSEN34Q9BSV6 310 aaKnown RBP15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 SENP6Q9GZR1 1112 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 VTA1Q9NP79 307 aa15.83■□□□□ 0.12
CSNK1D-208ENST00000578501 PPP1R11O60927 126 aaPredicted RBP15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 PGK1P00558 417 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 EDNRBP24530 442 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 IQSEC1Q6DN90 963 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 KLHDC9Q8NEP7 349 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 PIGSQ96S52 555 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 MYL10Q9BUA6 226 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 LRRC2Q9BYS8 371 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 UPF3AQ9H1J1 476 aaKnown RBP15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 PHF24Q9UPV7 400 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 PCDHA1Q9Y5I3 950 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 LCTP09848 1927 aa15.82■□□□□ 0.12
CSNK1D-208ENST00000578501 OPLAHO14841 1288 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 ADCY6O43306 1168 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 CST5P28325 142 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 HSD17B4P51659 736 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 GJA9P57773 515 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 TNFAIP2Q03169 654 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 TAPT1Q6NXT6 567 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 SYNE3Q6ZMZ3 975 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 UNC80Q8N2C7 3258 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 FBXL16Q8N461 479 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 FANCBQ8NB91 859 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 SYTL5Q8TDW5 730 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 TBC1D5Q92609 795 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 SEMA6BQ9H3T3 888 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 SYNRGQ9UMZ2 1314 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 Q9Y3F1 56 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 SNX14Q9Y5W7 946 aa15.81■□□□□ 0.12
CSNK1D-208ENST00000578501 MCM3APO60318 1980 aa15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 RBM47A0AV96 593 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 RCAN1P53805 252 aa15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 SNX17Q15036 470 aa15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 C1orf53Q5VUE5 145 aa15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 CCSAPQ6IQ19 270 aaPredicted RBP15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 APOA5Q6Q788 366 aa15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 FBXO16Q8IX29 292 aaPredicted RBP15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 NSUN6Q8TEA1 469 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 LENG1Q96BZ8 264 aaPredicted RBP15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 RRP36Q96EU6 259 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 IWS1Q96ST2 819 aa15.8■□□□□ 0.12
CSNK1D-208ENST00000578501 USP26Q9BXU7 913 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms