RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CYP2C18P33260 490 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 PURAQ00577 322 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 BEX3Q00994 111 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 BFSP2Q13515 415 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 CCDC96Q2M329 555 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 MUM1L1Q5H9M0 696 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 GPATCH4Q5T3I0 446 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 C20orf194Q5TEA3 1177 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 SAMD3Q8N6K7 520 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 SCFD2Q8WU76 684 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 GBF1Q92538 1859 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 SCN10AQ9Y5Y9 1956 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 TNKSO95271 1327 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 KCTD1Q719H9 257 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 WNT8AQ9H1J5 351 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 GPHNQ9NQX3 736 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 ISY1Q9ULR0 285 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 TULP1O00294 542 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 FOXP2O15409 715 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 RBL2Q08999 1139 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 FBXO16Q8IX29 292 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 NKX2-4Q9H2Z4 354 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 A6NJR5 290 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 ACRP10323 421 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 MCMDC2Q4G0Z9 681 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 NSMFQ6X4W1 530 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 USP38Q8NB14 1042 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 OR6J1Q8NGC5 347 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 ARIH1Q9Y4X5 557 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-214ENST00000578112 RANBP6O60518 1105 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 PDE4DQ08499 809 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 BAATQ14032 418 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 PPP2R5BQ15173 497 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 RETREG2Q8NC44 543 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 PRDM12Q9H4Q4 367 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 COG5Q9UP83 839 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 ABCB11O95342 1321 aa13.21□□□□□ -0.29
SMARCE1-214ENST00000578112 EFCAB14O75071 495 aa13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 PBX2P40425 430 aa13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 ZNF543Q08ER8 600 aa13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 DGKHQ86XP1 1220 aa13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 CLEC4DQ8WXI8 215 aa13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 ANKS1AQ92625 1134 aa13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 MAP3K20Q9NYL2 800 aaKnown RBP13.21□□□□□ -0.3
SMARCE1-214ENST00000578112 PDHBP11177 359 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 CTDSPL2Q05D32 466 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 PPP2R2DQ66LE6 453 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 IWS1Q96ST2 819 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 YBX2Q9Y2T7 364 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 KIF28PB7ZC32 967 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 AFAP1L1Q8TED9 768 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
SMARCE1-214ENST00000578112 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-214ENST00000578112 TRAF1Q13077 416 aa13.19□□□□□ -0.3
SMARCE1-214ENST00000578112 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
SMARCE1-214ENST00000578112 EMID1Q96A84 441 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-214ENST00000578112 PTPDC1A2A3K4 754 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 GRXCR1A8MXD5 290 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 MYL3P08590 195 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 GHRHRQ02643 423 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 ADGRE1Q14246 886 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 ESR2Q92731 530 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 KATNAL1Q9BW62 490 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 CCDC171Q6TFL3 1326 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 FGAP02671 866 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 CCL23P55773 120 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 ASPRV1Q53RT3 343 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 C1QTNF1Q9BXJ1 281 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 UMODL1Q5DID0 1318 aa13.18□□□□□ -0.3
SMARCE1-214ENST00000578112 HIP1O00291 1037 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 NFIBO00712 420 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 GH1P01241 217 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 IQCF3P0C7M6 154 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 PDE1AP54750 535 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 PSMC6P62333 389 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 KCNV1Q6PIU1 500 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 OTOP2Q7RTS6 562 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 VWCEQ96DN2 955 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 COL4A6Q14031 1691 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms