RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 SAP130Q9H0E3 1048 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 ATP6V0A4Q9HBG4 840 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 TYW1Q9NV66 732 aaKnown RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 DACT1Q9NYF0 836 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 CPSF2Q9P2I0 782 aaKnown RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 USP21Q9UK80 565 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 ODF2LQ9ULJ1 636 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 MYO6Q9UM54 1294 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 MAST3O60307 1309 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 CNTNAP4Q9C0A0 1308 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 COL24A1Q17RW2 1714 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 LIN7AO14910 233 aaPredicted RBP7.77□□□□□ -1.17
KRT39-203ENST00000578078 URI1O94763 535 aaPredicted RBP7.77□□□□□ -1.17
KRT39-203ENST00000578078 SLC5A1P13866 664 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 IGHMBP2P38935 993 aaKnown RBP7.77□□□□□ -1.17
KRT39-203ENST00000578078 MAGEA8P43361 318 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 LMNB2Q03252 620 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 DNM1Q05193 864 aaKnown RBP7.77□□□□□ -1.17
KRT39-203ENST00000578078 PAK2Q13177 524 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 MEX3CQ5U5Q3 659 aaKnown RBP7.77□□□□□ -1.17
KRT39-203ENST00000578078 ILDR2Q71H61 639 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 SRGAP1Q7Z6B7 1085 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 TTC6Q86TZ1 520 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 LPIN2Q92539 896 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 GPRASP2Q96D09 838 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 CCDC34Q96HJ3 373 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 BAG1Q99933 345 aaPredicted RBP7.77□□□□□ -1.17
KRT39-203ENST00000578078 UBA5Q9GZZ9 404 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 PDE11AQ9HCR9 933 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 TRMT1Q9NXH9 659 aaKnown RBP7.77□□□□□ -1.17
KRT39-203ENST00000578078 GGT7Q9UJ14 662 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 FAM169AQ9Y6X4 670 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 CHD4Q14839 1912 aa7.77□□□□□ -1.17
KRT39-203ENST00000578078 CBFA2T2O43439 604 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 CREB3O43889 395 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 NEBLO76041 1014 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 SNUPNO95149 360 aaKnown RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 LARGE1O95461 756 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 NTSR2O95665 410 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 PDGFRBP09619 1106 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 EZRP15311 586 aaKnown RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 JUNDP17535 347 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 ZAP70P43403 619 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 TBC1D8BQ0IIM8 1120 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 PDIA5Q14554 519 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 ME3Q16798 604 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 PUS10Q3MIT2 529 aaKnown RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 SDCCAG8Q86SQ7 713 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 ZBTB33Q86T24 672 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 VGLL2Q8N8G2 317 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 DRAXINQ8NBI3 349 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 LINC00116Q8NCU8 138 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 C3orf20Q8ND61 904 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 N4BP2L2Q92802 583 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 ZKSCAN4Q969J2 545 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 HOOK2Q96ED9 719 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 SPOCK3Q9BQ16 436 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 DNAJC25Q9H1X3 360 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 MYH13Q9UKX3 1938 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 CFAP45Q9UL16 551 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 LHX6Q9UPM6 363 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 ATRNO75882 1429 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 M0R2C6 588 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 CYP21A2P08686 494 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 HSPD1P10809 573 aaKnown RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 PECAM1P16284 738 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 MZF1P28698 734 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 GJB2P29033 226 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 FNTAP49354 379 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 BLOC1S3Q6QNY0 202 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 KLHL23Q8NBE8 558 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 APPBP2Q92624 585 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 P3H4Q92791 437 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 SRPK1Q96SB4 655 aaKnown RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 CDC5LQ99459 802 aaKnown RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 JPH2Q9BR39 696 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 SUDS3Q9H7L9 328 aaPredicted RBP7.76□□□□□ -1.17
KRT39-203ENST00000578078 STIM2Q9P246 746 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 ANAPC4Q9UJX5 808 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 PRR12Q9ULL5 1215 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 TPCN1Q9ULQ1 816 aa7.76□□□□□ -1.17
KRT39-203ENST00000578078 C4AP0C0L4 1744 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 C4BP0C0L5 1744 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 IKBKBO14920 756 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 NPHP1O15259 732 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 STX10O60499 249 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 KIAA0754O94854 1291 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 PRPF6O94906 941 aaKnown RBP7.75□□□□□ -1.17
KRT39-203ENST00000578078 CHGBP05060 677 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 MYBL2P10244 700 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 SCP2P22307 547 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 MCAMP43121 646 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 RPS6KA3P51812 740 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 CHMP4BP1P59074 171 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 PPFIA1Q13136 1202 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 TOB2Q14106 344 aaPredicted RBP7.75□□□□□ -1.17
KRT39-203ENST00000578078 SCARF1Q14162 830 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 CASP8Q14790 479 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms