RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TMCO2Q7Z6W1 182 aaPredicted RBP19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 GMCL1P1Q8NEA9 526 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 STRBPQ96SI9 672 aaKnown RBP19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 ZBED2Q9BTP6 218 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 WDR11Q9BZH6 1224 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 VTA1Q9NP79 307 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 MTUS1Q9ULD2 1270 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 ZNF536O15090 1300 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 GSG1L2A8MUP6 293 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 CPT1AP50416 773 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 MUM1L1Q5H9M0 696 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 NSMFQ6X4W1 530 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 FAM178BQ8IXR5 827 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 CHURC1Q8WUH1 139 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 MTG1Q9BT17 334 aaPredicted RBP19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 UBE2ZQ9H832 354 aaPredicted RBP19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 CYP39A1Q9NYL5 469 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 LMCD1Q9NZU5 365 aa19.39■□□□□ 0.69
CTDNEP1-211ENST00000575783 PITPNM1O00562 1244 aa19.38■□□□□ 0.69
CTDNEP1-211ENST00000575783 KCNA5P22460 613 aa19.38■□□□□ 0.69
CTDNEP1-211ENST00000575783 CHMP4BP1P59074 171 aa19.38■□□□□ 0.69
CTDNEP1-211ENST00000575783 STAG1Q8WVM7 1258 aa19.38■□□□□ 0.69
CTDNEP1-211ENST00000575783 NOD1Q9Y239 953 aa19.38■□□□□ 0.69
CTDNEP1-211ENST00000575783 BAIAP3O94812 1187 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 ALADP13716 330 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 MCCP23508 829 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 BFSP2Q13515 415 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 FAM160B2Q86V87 743 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 OR6J1Q8NGC5 347 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 ZNF287Q9HBT7 754 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 SYNPO2Q9UMS6 1093 aa19.37■□□□□ 0.69
CTDNEP1-211ENST00000575783 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.36■□□□□ 0.69
CTDNEP1-211ENST00000575783 SLC1A4P43007 532 aa19.36■□□□□ 0.69
CTDNEP1-211ENST00000575783 GIMAP6Q6P9H5 292 aa19.36■□□□□ 0.69
CTDNEP1-211ENST00000575783 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.36■□□□□ 0.69
CTDNEP1-211ENST00000575783 SUGCTQ9HAC7 445 aa19.36■□□□□ 0.69
CTDNEP1-211ENST00000575783 APPP05067 770 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 TSPY3P0CV98 308 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 TSPY8P0CW00 308 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 IL9P15248 144 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 TDO2P48775 406 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 WDR5P61964 334 aaKnown RBP19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 NHLH1Q02575 133 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 LEXMQ3ZCV2 418 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 BRDTQ58F21 947 aaPredicted RBP19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 NFRKBQ6P4R8 1299 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 KCTD1Q719H9 257 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 MORC4Q8TE76 937 aa19.35■□□□□ 0.69
CTDNEP1-211ENST00000575783 BAATQ14032 418 aaPredicted RBP19.34■□□□□ 0.69
CTDNEP1-211ENST00000575783 PTCRAQ6ISU1 281 aaPredicted RBP19.34■□□□□ 0.69
CTDNEP1-211ENST00000575783 GMCL1Q96IK5 515 aa19.34■□□□□ 0.69
CTDNEP1-211ENST00000575783 ADD3Q9UEY8 706 aaKnown RBP19.34■□□□□ 0.69
CTDNEP1-211ENST00000575783 CCPG1Q9ULG6 757 aa19.34■□□□□ 0.69
CTDNEP1-211ENST00000575783 RAB11FIP3O75154 756 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 DEFB103AP81534 67 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 TFAP4Q01664 338 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 NEDD1Q8NHV4 660 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 PANK1Q8TE04 598 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 FBXL18Q96ME1 805 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 TGS1Q96RS0 853 aaKnown RBP19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 CRBNQ96SW2 442 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 PRR12Q9ULL5 1215 aa19.33■□□□□ 0.68
CTDNEP1-211ENST00000575783 GREB1LQ9C091 1923 aaPredicted RBP19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 HMMRO75330 724 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 ALDH5A1P51649 535 aaPredicted RBP19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 PTGISQ16647 500 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 FAM117BQ6P1L5 589 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 OSBP2Q969R2 916 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 SNX27Q96L92 541 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 RAD9AQ99638 391 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 EPB41L4AQ9HCS5 686 aaPredicted RBP19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 MTMR7Q9Y216 660 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 SCN5AQ14524 2016 aa19.32■□□□□ 0.68
CTDNEP1-211ENST00000575783 RAD50Q92878 1312 aa19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 KPNA6O60684 536 aa19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 ERVK-21P61565 698 aa19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 PTPN11Q06124 597 aaPredicted RBP19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 LRRFIP1Q32MZ4 808 aaKnown RBP19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 RCSD1Q6JBY9 416 aa19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 CCDC155Q8N6L0 562 aa19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 COPS5Q92905 334 aa19.31■□□□□ 0.68
CTDNEP1-211ENST00000575783 RBM47A0AV96 593 aaKnown RBP19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 PTPDC1A2A3K4 754 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 LINC01553A4QN01 128 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 GRXCR2A6NFK2 248 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 DCXO43602 365 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 PLA2G6O60733 806 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 GJB5O95377 273 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 GPNMBQ14956 572 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 PPP2R5BQ15173 497 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 SIRT2Q8IXJ6 389 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 AFAP1L1Q8TED9 768 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 STX8Q9UNK0 236 aa19.3■□□□□ 0.68
CTDNEP1-211ENST00000575783 A6NJR5 290 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 H3BQ06 376 aaPredicted RBP19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 RBAK-RBAKDNI3L0D1 243 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 GPAA1O43292 621 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 ICAM1P05362 532 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms