RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 HTATIP2Q9BUP3 242 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 AMNQ9BXJ7 453 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 C11orf49Q9H6J7 331 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 ASTN1O14525 1302 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 ASB14A6NK59 587 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 CYTH3O43739 400 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 HMGB1P09429 215 aaKnown RBP15.38■□□□□ 0.05
RPAIN-216ENST00000575599 CALM1P0DP23 149 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 CALM2P0DP24 149 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 CALM3P0DP25 149 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 RARBP10826 455 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 FGD1P98174 961 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 EXOSC10Q01780 885 aaKnown RBP15.38■□□□□ 0.05
RPAIN-216ENST00000575599 ACVR2BQ13705 512 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 DPF3Q92784 378 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 MTMR8Q96EF0 704 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 MAP3K14Q99558 947 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 ABHD16BQ9H3Z7 469 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 RIOX1Q9H6W3 641 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 ADD3Q9UEY8 706 aaKnown RBP15.38■□□□□ 0.05
RPAIN-216ENST00000575599 LRRC37A2A6NM11 1700 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 PDE4DIPQ5VU43 2346 aa15.38■□□□□ 0.05
RPAIN-216ENST00000575599 PPP1R11O60927 126 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-216ENST00000575599 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
RPAIN-216ENST00000575599 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-216ENST00000575599 GJC2Q5T442 439 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-216ENST00000575599 BLOC1S2Q6QNY1 142 aa15.37■□□□□ 0.05
RPAIN-216ENST00000575599 SYNE3Q6ZMZ3 975 aa15.37■□□□□ 0.05
RPAIN-216ENST00000575599 EEPD1Q7L9B9 569 aa15.37■□□□□ 0.05
RPAIN-216ENST00000575599 SGMS1Q86VZ5 419 aa15.37■□□□□ 0.05
RPAIN-216ENST00000575599 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
RPAIN-216ENST00000575599 XPNPEP3Q9NQH7 507 aa15.37■□□□□ 0.05
RPAIN-216ENST00000575599 FAM184BQ9ULE4 1060 aa15.37■□□□□ 0.05
RPAIN-216ENST00000575599 MRPL11Q9Y3B7 192 aaKnown RBP15.37■□□□□ 0.05
RPAIN-216ENST00000575599 BAZ2BQ9UIF8 2168 aaKnown RBP15.37■□□□□ 0.05
RPAIN-216ENST00000575599 CCDC144BQ3MJ40 725 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 C8orf34Q49A92 452 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 APOA5Q6Q788 366 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 MCF2L2Q86YR7 1114 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 FBXO16Q8IX29 292 aaPredicted RBP15.36■□□□□ 0.05
RPAIN-216ENST00000575599 CMTR1Q8N1G2 835 aaKnown RBP15.36■□□□□ 0.05
RPAIN-216ENST00000575599 ARRDC4Q8NCT1 418 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 TBC1D5Q92609 795 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 USP26Q9BXU7 913 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
RPAIN-216ENST00000575599 PCDHA1Q9Y5I3 950 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 KBTBD13C9JR72 458 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 DNM1LO00429 736 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 EPB41L2O43491 1005 aaKnown RBP15.36■□□□□ 0.05
RPAIN-216ENST00000575599 PGK1P00558 417 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 CFBP00751 764 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
RPAIN-216ENST00000575599 PSMA5P28066 241 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 GNAQP50148 359 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 Q6ZUG5 572 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 RGS22Q8NE09 1264 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 RRP36Q96EU6 259 aaKnown RBP15.36■□□□□ 0.05
RPAIN-216ENST00000575599 LZTS2Q9BRK4 669 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 SPZ1Q9BXG8 430 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 BACH2Q9BYV9 841 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 KATNBL1Q9H079 304 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
RPAIN-216ENST00000575599 BRPF3Q9ULD4 1205 aa15.36■□□□□ 0.05
RPAIN-216ENST00000575599 KLF18A0A0U1RQI7 1052 aa15.35■□□□□ 0.05
RPAIN-216ENST00000575599 ZBTB43O43298 467 aa15.35■□□□□ 0.05
RPAIN-216ENST00000575599 ADCY6O43306 1168 aa15.35■□□□□ 0.05
RPAIN-216ENST00000575599 RPS6KB1P23443 525 aa15.35■□□□□ 0.05
RPAIN-216ENST00000575599 LRRC41Q15345 812 aa15.35■□□□□ 0.05
RPAIN-216ENST00000575599 CCDC82Q8N4S0 544 aa15.35■□□□□ 0.05
RPAIN-216ENST00000575599 SRBD1Q8N5C6 995 aaKnown RBP15.35■□□□□ 0.05
RPAIN-216ENST00000575599 FANCBQ8NB91 859 aa15.35■□□□□ 0.05
RPAIN-216ENST00000575599 SYTL5Q8TDW5 730 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-216ENST00000575599 MPHOSPH6Q99547 160 aaKnown RBP15.35■□□□□ 0.05
RPAIN-216ENST00000575599 SENP6Q9GZR1 1112 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-216ENST00000575599 ALPK3Q96L96 1907 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 SYNRGQ9UMZ2 1314 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-216ENST00000575599 OPLAHO14841 1288 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 EVI5O60447 810 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 COL6A1P12109 1028 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 ADCYAP1R1P41586 468 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 PDE4DQ08499 809 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 APOBRQ0VD83 1088 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 TRAF1Q13077 416 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 RTN1Q16799 776 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 PRPF38BQ5VTL8 546 aaKnown RBP15.34■□□□□ 0.05
RPAIN-216ENST00000575599 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 NOL8Q76FK4 1167 aaKnown RBP15.34■□□□□ 0.05
RPAIN-216ENST00000575599 RNF180Q86T96 592 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 DNERQ8NFT8 737 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 BRF1Q92994 677 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 PDGFCQ9NRA1 345 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 COL20A1Q9P218 1284 aa15.34■□□□□ 0.05
RPAIN-216ENST00000575599 GOLGA8AA7E2F4 631 aa15.33■□□□□ 0.04
RPAIN-216ENST00000575599 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.04
RPAIN-216ENST00000575599 DUSP11O75319 330 aaKnown RBP15.33■□□□□ 0.04
RPAIN-216ENST00000575599 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
RPAIN-216ENST00000575599 TNFAIP2Q03169 654 aa15.33■□□□□ 0.04
RPAIN-216ENST00000575599 MORC4Q8TE76 937 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms