RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PARP1P09874 1014 aaKnown RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 C6orf222P0C671 652 aaPredicted RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 ANAPC15P60006 121 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 RPS6P62753 249 aaKnown RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 GHRHRQ02643 423 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 TNFAIP2Q03169 654 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 TRDNQ13061 729 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 KCNA10Q16322 511 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 RNF207Q6ZRF8 634 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 STOX1Q6ZVD7 989 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 ADGRF4Q8IZF3 695 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 UBE2OQ9C0C9 1292 aaKnown RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 CPVLQ9H3G5 476 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 PRKAG2Q9UGJ0 569 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 TAF6LQ9Y6J9 622 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 PALM3A6NDB9 673 aaPredicted RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 KIAA0355O15063 1070 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 ASGR1P07306 291 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 CLTBP09497 229 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 SMPD1P17405 629 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 TLE2Q04725 743 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 IQSEC1Q6DN90 963 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 RALYLQ86SE5 291 aaKnown RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 TLK2Q86UE8 772 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 MB21D2Q8IYB1 491 aaPredicted RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 GLT1D1Q96MS3 346 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 LBHD1Q9BQE6 289 aaPredicted RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 MTA3Q9BTC8 594 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 LSG1Q9H089 658 aaKnown RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 ANO2Q9NQ90 1003 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 MAD2L2Q9UI95 211 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 RBM8AQ9Y5S9 174 aaKnown RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
LITAF-216ENST00000574848 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
LITAF-216ENST00000574848 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
LITAF-216ENST00000574848 CDK7P50613 346 aa12.3□□□□□ -0.44
LITAF-216ENST00000574848 ANTXR2P58335 489 aa12.3□□□□□ -0.44
LITAF-216ENST00000574848 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
LITAF-216ENST00000574848 GRM4Q14833 912 aa12.3□□□□□ -0.44
LITAF-216ENST00000574848 DUSP28Q4G0W2 176 aa12.3□□□□□ -0.44
LITAF-216ENST00000574848 STAG2Q8N3U4 1231 aa12.3□□□□□ -0.44
LITAF-216ENST00000574848 TRIM43Q96BQ3 446 aaPredicted RBP12.3□□□□□ -0.44
LITAF-216ENST00000574848 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
LITAF-216ENST00000574848 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
LITAF-216ENST00000574848 KLRF2D3W0D1 207 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 CABYRO75952 493 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 HSP90AA1P07900 732 aaKnown RBP12.29□□□□□ -0.44
LITAF-216ENST00000574848 CALML3P27482 149 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 FAAP100Q0VG06 881 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 TROAPQ12815 778 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 SART3Q15020 963 aaKnown RBP12.29□□□□□ -0.44
LITAF-216ENST00000574848 FSCN1Q16658 493 aaKnown RBP12.29□□□□□ -0.44
LITAF-216ENST00000574848 SLC35G1Q2M3R5 365 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 USH1GQ495M9 461 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 GNASQ5JWF2 1037 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 MCF2L2Q86YR7 1114 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 SLC43A3Q8NBI5 491 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 MPHOSPH6Q99547 160 aaKnown RBP12.29□□□□□ -0.44
LITAF-216ENST00000574848 SEZ6LQ9BYH1 1024 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 PRDM5Q9NQX1 630 aaPredicted RBP12.29□□□□□ -0.44
LITAF-216ENST00000574848 TBX21Q9UL17 535 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 KIAA1217Q5T5P2 1943 aa12.29□□□□□ -0.44
LITAF-216ENST00000574848 ERICH2A1L162 156 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 K7ELQ4 463 aaPredicted RBP12.28□□□□□ -0.44
LITAF-216ENST00000574848 ARVCFO00192 962 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 OPLAHO14841 1288 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 IFIT3O14879 490 aaKnown RBP12.28□□□□□ -0.44
LITAF-216ENST00000574848 ZBTB5O15062 677 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 NKRFO15226 690 aaKnown RBP eCLIP12.28□□□□□ -0.44
LITAF-216ENST00000574848 PQBP1O60828 265 aaKnown RBP12.28□□□□□ -0.44
LITAF-216ENST00000574848 PPP1R11O60927 126 aaPredicted RBP12.28□□□□□ -0.44
LITAF-216ENST00000574848 MCM2P49736 904 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 HSD17B4P51659 736 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 BEX3Q00994 111 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 WTAPQ15007 396 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 EEPD1Q7L9B9 569 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 SYTL5Q8TDW5 730 aaPredicted RBP12.28□□□□□ -0.44
LITAF-216ENST00000574848 IGDCC4Q8TDY8 1250 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 MAP3K14Q99558 947 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 AP5M1Q9H0R1 490 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms