RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 NUP88Q99567 741 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-208ENST00000574755 GLT8D2Q9H1C3 349 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.79■□□□□ 0.12
VPS33B-208ENST00000574755 DDX25Q9UHL0 483 aaKnown RBP15.79■□□□□ 0.12
VPS33B-208ENST00000574755 PAXBP1Q9Y5B6 917 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 NDUFB10O96000 172 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 JAG1P78504 1218 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 STIM1Q13586 685 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 ADSSL1Q8N142 457 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 TRIM9Q9C026 710 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 HERC5Q9UII4 1024 aaKnown RBP15.79■□□□□ 0.12
VPS33B-208ENST00000574755 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-208ENST00000574755 POTEMA6NI47 508 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L15C9J2P7 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L13C9JLJ4 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L11C9JVI0 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L18D6R9N7 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L22D6RA61 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L17D6RBQ6 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L19D6RCP7 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L20D6RJB6 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 VIL1P09327 827 aaKnown RBP15.78■□□□□ 0.12
VPS33B-208ENST00000574755 KCNA3P22001 575 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 ADKP55263 362 aaKnown RBP15.78■□□□□ 0.12
VPS33B-208ENST00000574755 AMPD3Q01432 767 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L24Q0WX57 530 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 SEMA3FQ13275 785 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 USP17L6PQ6QN14 398 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 CREBRFQ8IUR6 639 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 CCDC47Q96A33 483 aaKnown RBP15.78■□□□□ 0.12
VPS33B-208ENST00000574755 GMCL1Q96IK5 515 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 CDK5RAP3Q96JB5 506 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 PPP1R13BQ96KQ4 1090 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 COL4A5P29400 1685 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 MARCH6O60337 910 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 CCT6AP40227 531 aaKnown RBP15.78■□□□□ 0.12
VPS33B-208ENST00000574755 ASIC1P78348 528 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 SPAG1Q07617 926 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 PDIA5Q14554 519 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 TC2NQ8N9U0 490 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 GIMAP8Q8ND71 665 aaPredicted RBP15.78■□□□□ 0.12
VPS33B-208ENST00000574755 ANKRD20A12PQ8NF67 263 aa15.78■□□□□ 0.12
VPS33B-208ENST00000574755 GCFC2P16383 781 aaKnown RBP15.77■□□□□ 0.12
VPS33B-208ENST00000574755 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
VPS33B-208ENST00000574755 KRT31Q15323 416 aa15.77■□□□□ 0.12
VPS33B-208ENST00000574755 BAG1Q99933 345 aaPredicted RBP15.77■□□□□ 0.12
VPS33B-208ENST00000574755 EXOC1Q9NV70 894 aa15.77■□□□□ 0.12
VPS33B-208ENST00000574755 ZNF70Q9UC06 446 aaPredicted RBP15.77■□□□□ 0.12
VPS33B-208ENST00000574755 TRIM49BA6NDI0 452 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 PSMA7O14818 248 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 ARHGAP6O43182 974 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 BMP3P12645 472 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 SNAP25P60880 206 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 PDE4DQ08499 809 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 GRB10Q13322 594 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 KRT79Q5XKE5 535 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 TMEM139Q8IV31 216 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 SNX29Q8TEQ0 813 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 GMLQ99445 158 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 C7orf25Q9BPX7 421 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 AMNQ9BXJ7 453 aa15.77■□□□□ 0.11
VPS33B-208ENST00000574755 LIMA1Q9UHB6 759 aaKnown RBP15.77■□□□□ 0.11
VPS33B-208ENST00000574755 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.11
VPS33B-208ENST00000574755 KCNJ18B7U540 433 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 H7C1D1 291 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 KIF2AO00139 706 aaPredicted RBP15.76■□□□□ 0.11
VPS33B-208ENST00000574755 N4BP3O15049 544 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 CCP110O43303 1012 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 KCNJ12Q14500 433 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 USH1GQ495M9 461 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 SV2BQ7L1I2 683 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 FAM151AQ8WW52 585 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 NAP1L4Q99733 375 aaKnown RBP15.76■□□□□ 0.11
VPS33B-208ENST00000574755 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 STK17AQ9UEE5 414 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 A0A1W2PRG0 241 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 RBM10P98175 930 aaKnown RBP15.76■□□□□ 0.11
VPS33B-208ENST00000574755 SYDE2Q5VT97 1194 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 PPFIBP1Q86W92 1011 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 FBXO11Q86XK2 927 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 SLC16A10Q8TF71 515 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 VPS16Q9H269 839 aa15.76■□□□□ 0.11
VPS33B-208ENST00000574755 LRRC10BA6NIK2 292 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 AKR1B15C9JRZ8 316 aaPredicted RBP15.75■□□□□ 0.11
VPS33B-208ENST00000574755 STX10O60499 249 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 PBX1P40424 430 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 PMS1P54277 932 aaKnown RBP15.75■□□□□ 0.11
VPS33B-208ENST00000574755 NIM1KQ8IY84 436 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 LARP4BQ92615 738 aaKnown RBP15.75■□□□□ 0.11
VPS33B-208ENST00000574755 HAS1Q92839 578 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 ANO3Q9BYT9 981 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 BLOC1S4Q9NUP1 217 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 PCDHA12Q9UN75 941 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 KIF18AQ8NI77 898 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 TSC1Q92574 1164 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 GJA10Q969M2 543 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms