RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 MBLAC2Q68D91 279 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 TMEM132EQ6IEE7 984 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 KCNN1Q92952 543 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 SGSM3Q96HU1 749 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 KRTAP4-12Q9BQ66 201 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 SIRPGQ9P1W8 387 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 KLHL14Q9P2G3 628 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 GULP1Q9UBP9 304 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 RWDD3Q9Y3V2 267 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 TEX51A0A1B0GUA7 166 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 IQCA1LA6NCM1 817 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 NFIBO00712 420 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 SEMA7AO75326 666 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 TSPAN15O95858 294 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 CPP00450 1065 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 VIPR1P32241 457 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 GRIA2P42262 883 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 GFRA1P56159 465 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 SRSF3P84103 164 aaKnown RBP7.45□□□□□ -1.22
CDC27-216ENST00000574304 OLFML2BQ68BL8 750 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 LZTR1Q8N653 840 aa7.45□□□□□ -1.22
CDC27-216ENST00000574304 SREK1Q8WXA9 508 aaKnown RBP7.45□□□□□ -1.22
CDC27-216ENST00000574304 KRTAP9-6A0A140TA67 174 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 CCDC85CA6NKD9 419 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 ETV2O00321 342 aaPredicted RBP7.44□□□□□ -1.22
CDC27-216ENST00000574304 PDPK1O15530 556 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 PPP1R11O60927 126 aaPredicted RBP7.44□□□□□ -1.22
CDC27-216ENST00000574304 KRT1P04264 644 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 DBHP09172 617 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 YBX3P16989 372 aaKnown RBP eCLIP7.44□□□□□ -1.22
CDC27-216ENST00000574304 RAP1GAPP47736 663 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 TMEM62Q0P6H9 643 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 HSP90AA2PQ14568 343 aaPredicted RBP7.44□□□□□ -1.22
CDC27-216ENST00000574304 CBX2Q14781 532 aaPredicted RBP7.44□□□□□ -1.22
CDC27-216ENST00000574304 NR1I3Q14994 352 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 PRSS53Q2L4Q9 553 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 E4F1Q66K89 784 aaPredicted RBP7.44□□□□□ -1.22
CDC27-216ENST00000574304 IQCEQ6IPM2 695 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 PAQR3Q6TCH7 311 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 RPTNQ6XPR3 784 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 TMEM145Q8NBT3 493 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 MTA3Q9BTC8 594 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 CCDC113Q9H0I3 377 aa7.44□□□□□ -1.22
CDC27-216ENST00000574304 MEFVO15553 781 aaPredicted RBP7.43□□□□□ -1.22
CDC27-216ENST00000574304 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 CYBBP04839 570 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 C1QTNF9P0C862 333 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 MED14OSP0DP75 135 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 GLDCP23378 1020 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 RBM10P98175 930 aaKnown RBP7.43□□□□□ -1.22
CDC27-216ENST00000574304 SERINC3Q13530 473 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 INF2Q27J81 1249 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 CABP7Q86V35 215 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 LRRC47Q8N1G4 583 aaKnown RBP7.43□□□□□ -1.22
CDC27-216ENST00000574304 KREMEN2Q8NCW0 462 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 DIO2Q92813 273 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 ZNF669Q96BR6 464 aaPredicted RBP7.43□□□□□ -1.22
CDC27-216ENST00000574304 AARSD1Q9BTE6 412 aaKnown RBP7.43□□□□□ -1.22
CDC27-216ENST00000574304 SGPP1Q9BX95 441 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 SIRT5Q9NXA8 310 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 FBLN5Q9UBX5 448 aa7.43□□□□□ -1.22
CDC27-216ENST00000574304 TMEFF2Q9UIK5 374 aaPredicted RBP7.43□□□□□ -1.22
CDC27-216ENST00000574304 GLI4P10075 376 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 MAPKAPK2P49137 400 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 DLG4P78352 724 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 MAP4K2Q12851 820 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 KCNAB2Q13303 367 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 RASGRF1Q13972 1273 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 PLEKHN1Q494U1 663 aaPredicted RBP7.42□□□□□ -1.22
CDC27-216ENST00000574304 ACBD5Q5T8D3 534 aaPredicted RBP7.42□□□□□ -1.22
CDC27-216ENST00000574304 SOGA3Q5TF21 947 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 DENND5AQ6IQ26 1287 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 ATG14Q6ZNE5 492 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 SPATC1Q76KD6 591 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 TMC6Q7Z403 805 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 CCDC103Q8IW40 242 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 PPIL6Q8IXY8 311 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 USP33Q8TEY7 942 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 KCTD13Q8WZ19 329 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 DPF3Q92784 378 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 C1orf159Q96HA4 380 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 IER2Q9BTL4 223 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 ARHGEF4Q9NR80 690 aa7.42□□□□□ -1.22
CDC27-216ENST00000574304 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.42□□□□□ -1.221e-6■■■□□ 18.3
CDC27-216ENST00000574304 MBD1Q9UIS9 605 aaPredicted RBP7.42□□□□□ -1.22
CDC27-216ENST00000574304 TCAF2A6NFQ2 919 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 ARNTLO00327 626 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 TESK1Q15569 626 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 MTERF2Q49AM1 385 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 SLC35F1Q5T1Q4 408 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 PMFBP1Q8TBY8 1022 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 SPATA9Q9BWV2 254 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 CNTD2Q9H8S5 307 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 GCM1Q9NP62 436 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 BTG4Q9NY30 223 aa7.41□□□□□ -1.22
CDC27-216ENST00000574304 ZC3H12DA2A288 527 aaKnown RBP7.4□□□□□ -1.22
CDC27-216ENST00000574304 F8W031 263 aaPredicted RBP7.4□□□□□ -1.22
CDC27-216ENST00000574304 PRODHO43272 600 aa7.4□□□□□ -1.22
CDC27-216ENST00000574304 DLX3O60479 287 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms