RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 COL20A1Q9P218 1284 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 RBM8AQ9Y5S9 174 aaKnown RBP13.24□□□□□ -0.29
RPAIN-214ENST00000574003 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-214ENST00000574003 MOXD2PA6NHM9 499 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 IFIT3O14879 490 aaKnown RBP13.23□□□□□ -0.29
RPAIN-214ENST00000574003 CLTBP09497 229 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 EPHB4P54760 987 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 ANTXR2P58335 489 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 FAAP100Q0VG06 881 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 SHHQ15465 462 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 C1orf53Q5VUE5 145 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 PPP1R13LQ8WUF5 828 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 COPS5Q92905 334 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 TAAR1Q96RJ0 339 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 SPC25Q9HBM1 224 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
RPAIN-214ENST00000574003 KLRF2D3W0D1 207 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-214ENST00000574003 PSMC6P62333 389 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 TRDNQ13061 729 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
RPAIN-214ENST00000574003 SYTL5Q8TDW5 730 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-214ENST00000574003 NUP133Q8WUM0 1156 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 GLT1D1Q96MS3 346 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 LSG1Q9H089 658 aaKnown RBP13.22□□□□□ -0.29
RPAIN-214ENST00000574003 VTA1Q9NP79 307 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
RPAIN-214ENST00000574003 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
RPAIN-214ENST00000574003 GRIN2DO15399 1336 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 KIAA0355O15063 1070 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 CDK7P50613 346 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 IQSEC1Q6DN90 963 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 RALYLQ86SE5 291 aaKnown RBP13.21□□□□□ -0.29
RPAIN-214ENST00000574003 FBXO11Q86XK2 927 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 MB21D2Q8IYB1 491 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-214ENST00000574003 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
RPAIN-214ENST00000574003 NCOA7Q8NI08 942 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 PIBF1Q8WXW3 757 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 MYL10Q9BUA6 226 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 AP5M1Q9H0R1 490 aa13.21□□□□□ -0.29
RPAIN-214ENST00000574003 A0A0U1RQG5 324 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-214ENST00000574003 PALM3A6NDB9 673 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-214ENST00000574003 RBAK-RBAKDNI3L0D1 243 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 ARVCFO00192 962 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 OPLAHO14841 1288 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 ARIH2O95376 493 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 RAG1P15918 1043 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 EDNRBP24530 442 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 NT5C2P49902 561 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 NKX3-2P78367 333 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 PDE4DQ08499 809 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 GRM4Q14833 912 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 WTAPQ15007 396 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 TMEM67Q5HYA8 995 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 ANKRD33Q7Z3H0 272 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 HOMER1Q86YM7 354 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 RAB11FIP4Q86YS3 637 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 PIGSQ96S52 555 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
RPAIN-214ENST00000574003 ELP1O95163 1332 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 ABCB11O95342 1321 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 LAMA2P24043 3122 aaKnown RBP13.19□□□□□ -0.3
RPAIN-214ENST00000574003 RBM47A0AV96 593 aaKnown RBP13.19□□□□□ -0.3
RPAIN-214ENST00000574003 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 SLC27A2O14975 620 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 CYTH3O43739 400 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 MYL3P08590 195 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 DUSP28Q4G0W2 176 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 DEFB123Q8N688 67 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 IGDCC4Q8TDY8 1250 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-214ENST00000574003 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 TBX21Q9UL17 535 aa13.19□□□□□ -0.3
RPAIN-214ENST00000574003 ERICH2A1L162 156 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 CFBP00751 764 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 EIF2AK2P19525 551 aaKnown RBP13.18□□□□□ -0.3
RPAIN-214ENST00000574003 RXRAP19793 462 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 HOXA13P31271 388 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-214ENST00000574003 TROAPQ12815 778 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 ITGA7Q13683 1181 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 SEPT14Q6ZU15 432 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-214ENST00000574003 DNERQ8NFT8 737 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 MTMR8Q96EF0 704 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 FAM161BQ96MY7 647 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 TOX2Q96NM4 488 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 ANO2Q9NQ90 1003 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
RPAIN-214ENST00000574003 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
RPAIN-214ENST00000574003 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 ZBTB5O15062 677 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms