RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 TAF1DQ9H5J8 278 aaPredicted RBP14.59□□□□□ -0.07
PRPF8-207ENST00000573681 EHMT1Q9H9B1 1298 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 MAP3K20Q9NYL2 800 aaKnown RBP14.59□□□□□ -0.07
PRPF8-207ENST00000573681 TMOD4Q9NZQ9 345 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 CCDC39Q9UFE4 941 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 SERTAD1Q9UHV2 236 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 TUBE1Q9UJT0 475 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 CSADQ9Y600 493 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 EDIL3O43854 480 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 VCAM1P19320 739 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 NLRP12P59046 1061 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 CALCRLQ16602 461 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 TMEM266Q2M3C6 531 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 ANO6Q4KMQ2 910 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 SH3D19Q5HYK7 790 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 MBOAT7Q96N66 472 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 RAB34Q9BZG1 259 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 TANGO6Q9C0B7 1094 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 RPAP3Q9H6T3 665 aaPredicted RBP14.58□□□□□ -0.08
PRPF8-207ENST00000573681 SLC38A10Q9HBR0 1119 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 FBXO28Q9NVF7 368 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 PPP1R9AQ9ULJ8 1098 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.08
PRPF8-207ENST00000573681 ADM5C9JUS6 153 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 ACTN4O43707 911 aaKnown RBP14.57□□□□□ -0.08
PRPF8-207ENST00000573681 MARCH6O60337 910 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 FLOT1O75955 427 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 SMC2O95347 1197 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 CYP3A4P08684 503 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.086e-11■■■■■ 46
PRPF8-207ENST00000573681 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.57□□□□□ -0.08
PRPF8-207ENST00000573681 DHX58Q96C10 678 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 HOXC10Q9NYD6 342 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
PRPF8-207ENST00000573681 CCPG1Q9ULG6 757 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 RABGAP1Q9Y3P9 1069 aa14.57□□□□□ -0.08
PRPF8-207ENST00000573681 OPLAHO14841 1288 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 TBX3O15119 743 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 SLC26A4O43511 780 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 CIITAP33076 1130 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 SREBF1P36956 1147 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 TXKP42681 527 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 ZNF165P49910 485 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 OAZ1P54368 228 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 ARHGAP4P98171 946 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 CCDC173Q0VFZ6 552 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 COG2Q14746 738 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 POSTNQ15063 836 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 Q4G0T1 1027 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 SH3RF1Q7Z6J0 888 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 ANKRD13AQ8IZ07 590 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 PDILTQ8N807 584 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 CRYGNQ8WXF5 182 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 CDCA5Q96FF9 252 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 MAF1Q9H063 256 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 CUEDC2Q9H467 287 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 ADAMTS5Q9UNA0 930 aa14.56□□□□□ -0.08
PRPF8-207ENST00000573681 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 TDP2O95551 362 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 TECP42680 631 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 SARSP49591 514 aaKnown RBP14.55□□□□□ -0.08
PRPF8-207ENST00000573681 GHRHRQ02643 423 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 PPATQ06203 517 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 PRKG1Q13976 671 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 VGLL4Q14135 290 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 RRAGBQ5VZM2 374 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
PRPF8-207ENST00000573681 CATSPERGQ6ZRH7 1159 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 ARMC9Q7Z3E5 817 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 CABP7Q86V35 215 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 SLFN12Q8IYM2 578 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 IGSF22Q8N9C0 903 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 TRIML1Q8N9V2 468 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 SMARCE1Q969G3 411 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 FAM20AQ96MK3 541 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 PPP1R9BQ96SB3 815 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 BPIFA3Q9BQP9 254 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 DNAJC25Q9H1X3 360 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 CBX8Q9HC52 389 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 LRWD1Q9UFC0 647 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 PCDHA5Q9Y5H7 936 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 SNCAIPQ9Y6H5 919 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 ZNF536O15090 1300 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 MYPNQ86TC9 1320 aa14.55□□□□□ -0.08
PRPF8-207ENST00000573681 A0A087X0B3 334 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 VWA5AO00534 786 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 CXCL11O14625 94 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 CFBP00751 764 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 MYL1P05976 194 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 DSG3P32926 999 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 ZNF76P36508 570 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 HMGCS2P54868 508 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 SEMA3FQ13275 785 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 PNOCQ13519 176 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 E2F4Q16254 413 aa14.54□□□□□ -0.08
PRPF8-207ENST00000573681 CT47A1Q5JQC4 288 aaPredicted RBP14.54□□□□□ -0.08
PRPF8-207ENST00000573681 ERO1BQ86YB8 467 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms