RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 IFIT3O14879 490 aaKnown RBP10.59□□□□□ -0.71
NDE1-207ENST00000573203 DHX16O60231 1041 aaKnown RBP10.59□□□□□ -0.71
NDE1-207ENST00000573203 ACVR2BQ13705 512 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 LRRC41Q15345 812 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 SEC23AQ15436 765 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 LRRC26Q2I0M4 334 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 CASC1Q6TDU7 716 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 IPO9Q96P70 1041 aaKnown RBP10.59□□□□□ -0.71
NDE1-207ENST00000573203 LSG1Q9H089 658 aaKnown RBP10.59□□□□□ -0.71
NDE1-207ENST00000573203 ABHD16BQ9H3Z7 469 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 ANO2Q9NQ90 1003 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 TAF6LQ9Y6J9 622 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 WDR19Q8NEZ3 1342 aa10.58□□□□□ -0.71
NDE1-207ENST00000573203 SOWAHBA6NEL2 793 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 NFIBO00712 420 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 PGK1P00558 417 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 BAATQ14032 418 aaPredicted RBP10.58□□□□□ -0.72
NDE1-207ENST00000573203 WTAPQ15007 396 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.72
NDE1-207ENST00000573203 USH1GQ495M9 461 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 HABP4Q5JVS0 413 aaKnown RBP10.58□□□□□ -0.72
NDE1-207ENST00000573203 STOX1Q6ZVD7 989 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 CHST3Q7LGC8 479 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 RNF180Q86T96 592 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 ADGRF4Q8IZF3 695 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 LENG1Q96BZ8 264 aaPredicted RBP10.58□□□□□ -0.72
NDE1-207ENST00000573203 VAT1LQ9HCJ6 419 aa10.58□□□□□ -0.72
NDE1-207ENST00000573203 ZMYND8Q9ULU4 1186 aaPredicted RBP10.58□□□□□ -0.72
NDE1-207ENST00000573203 DUSP11O75319 330 aaKnown RBP10.57□□□□□ -0.72
NDE1-207ENST00000573203 CDC45O75419 566 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
NDE1-207ENST00000573203 CALML3P27482 149 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 ADCYAP1R1P41586 468 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 CCDC144BQ3MJ40 725 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 TMEM67Q5HYA8 995 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 RNF207Q6ZRF8 634 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 MB21D2Q8IYB1 491 aaPredicted RBP10.57□□□□□ -0.72
NDE1-207ENST00000573203 STAG2Q8N3U4 1231 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 CLEC4DQ8WXI8 215 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
NDE1-207ENST00000573203 SPC25Q9HBM1 224 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 ADD3Q9UEY8 706 aaKnown RBP10.57□□□□□ -0.72
NDE1-207ENST00000573203 LRRC37A2A6NM11 1700 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 ASTN1O14525 1302 aa10.57□□□□□ -0.72
NDE1-207ENST00000573203 KLRF2D3W0D1 207 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 SLC27A2O14975 620 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 SYN1P17600 705 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 ALDH5A1P51649 535 aaPredicted RBP10.56□□□□□ -0.72
NDE1-207ENST00000573203 ANTXR2P58335 489 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 RTP1P59025 263 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 CREB3L3Q68CJ9 461 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 SLC30A10Q6XR72 485 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 SLC39A5Q6ZMH5 540 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
NDE1-207ENST00000573203 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 FBXO11Q86XK2 927 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 FERMT2Q96AC1 680 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 JMJD4Q9H9V9 463 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
NDE1-207ENST00000573203 MAD2L2Q9UI95 211 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 ATP11BQ9Y2G3 1177 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 ABCB11O95342 1321 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
NDE1-207ENST00000573203 LOC102724159A0A0B4J2E5 919 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 PRC1O43663 620 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 ADAMTS4O75173 837 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 SLC34A2O95436 690 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 C6orf222P0C671 652 aaPredicted RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 MCM5P33992 734 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 RPS6P62753 249 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 TNFAIP2Q03169 654 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 GRM4Q14833 912 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 NECTIN1Q15223 517 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 PWP2Q15269 919 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 RNF20Q5VTR2 975 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 EEPD1Q7L9B9 569 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 FBXO16Q8IX29 292 aaPredicted RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 IGDCC4Q8TDY8 1250 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 MPHOSPH6Q99547 160 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 KATNBL1Q9H079 304 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 UPF2Q9HAU5 1272 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 PHF24Q9UPV7 400 aa10.55□□□□□ -0.72
NDE1-207ENST00000573203 MRPL11Q9Y3B7 192 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 BAZ2BQ9UIF8 2168 aaKnown RBP10.55□□□□□ -0.72
NDE1-207ENST00000573203 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.54□□□□□ -0.72
NDE1-207ENST00000573203 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
NDE1-207ENST00000573203 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 B4DLN1 442 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 ADCY6O43306 1168 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 MRPL12P52815 198 aaKnown RBP10.54□□□□□ -0.72
NDE1-207ENST00000573203 ACLYP53396 1101 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms