RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 EEPD1Q7L9B9 569 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 RGS22Q8NE09 1264 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 ESYT1Q9BSJ8 1104 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 UBAC1Q9BSL1 405 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 UBE2OQ9C0C9 1292 aaKnown RBP20.24■□□□□ 0.83
SMG6-212ENST00000573153 VTA1Q9NP79 307 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 PNMA2Q9UL42 364 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 GRIN2DO15399 1336 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 LAMA2P24043 3122 aaKnown RBP20.23■□□□□ 0.83
SMG6-212ENST00000573153 KIAA0355O15063 1070 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 CYTH3O43739 400 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 PARP1P09874 1014 aaKnown RBP20.23■□□□□ 0.83
SMG6-212ENST00000573153 USH1GQ495M9 461 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 BMP2KLQ5H9B9 411 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 TLK2Q86UE8 772 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 SLC43A3Q8NBI5 491 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 IGDCC4Q8TDY8 1250 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 STARD7Q9NQZ5 370 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 TBX21Q9UL17 535 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 ELP1O95163 1332 aa20.23■□□□□ 0.83
SMG6-212ENST00000573153 PTPDC1A2A3K4 754 aa20.22■□□□□ 0.83
SMG6-212ENST00000573153 CALML3P27482 149 aa20.22■□□□□ 0.83
SMG6-212ENST00000573153 EPHB4P54760 987 aa20.22■□□□□ 0.83
SMG6-212ENST00000573153 GRM4Q14833 912 aa20.22■□□□□ 0.83
SMG6-212ENST00000573153 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
SMG6-212ENST00000573153 SYTL5Q8TDW5 730 aaPredicted RBP20.22■□□□□ 0.83
SMG6-212ENST00000573153 TOX2Q96NM4 488 aa20.22■□□□□ 0.83
SMG6-212ENST00000573153 GPHNQ9NQX3 736 aaPredicted RBP20.22■□□□□ 0.83
SMG6-212ENST00000573153 CLTBP09497 229 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 NECTIN1Q15223 517 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 DUSP28Q4G0W2 176 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 GNASQ5JWF2 1037 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 C9orf50Q5SZB4 431 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 IQSEC1Q6DN90 963 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 BADQ92934 168 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 MAF1Q9H063 256 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 ADD3Q9UEY8 706 aaKnown RBP20.21■□□□□ 0.83
SMG6-212ENST00000573153 Q9Y3F1 56 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 MYH6P13533 1939 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 ABCB11O95342 1321 aa20.21■□□□□ 0.83
SMG6-212ENST00000573153 KLRF2D3W0D1 207 aa20.2■□□□□ 0.82
SMG6-212ENST00000573153 PQBP1O60828 265 aaKnown RBP20.2■□□□□ 0.82
SMG6-212ENST00000573153 FAM126BQ8IXS8 530 aa20.2■□□□□ 0.82
SMG6-212ENST00000573153 PCSK9Q8NBP7 692 aaKnown RBP20.2■□□□□ 0.82
SMG6-212ENST00000573153 DNERQ8NFT8 737 aa20.2■□□□□ 0.82
SMG6-212ENST00000573153 NCOA7Q8NI08 942 aa20.2■□□□□ 0.82
SMG6-212ENST00000573153 RIOX1Q9H6W3 641 aa20.2■□□□□ 0.82
SMG6-212ENST00000573153 PRDM5Q9NQX1 630 aaPredicted RBP20.2■□□□□ 0.82
SMG6-212ENST00000573153 SLC27A2O14975 620 aa20.19■□□□□ 0.82
SMG6-212ENST00000573153 ARIH2O95376 493 aa20.19■□□□□ 0.82
SMG6-212ENST00000573153 TRDNQ13061 729 aa20.19■□□□□ 0.82
SMG6-212ENST00000573153 CXCL17Q6UXB2 119 aa20.19■□□□□ 0.82
SMG6-212ENST00000573153 NUP133Q8WUM0 1156 aa20.19■□□□□ 0.82
SMG6-212ENST00000573153 TAAR1Q96RJ0 339 aa20.19■□□□□ 0.82
SMG6-212ENST00000573153 LY9Q9HBG7 655 aa20.19■□□□□ 0.82
SMG6-212ENST00000573153 ARVCFO00192 962 aa20.18■□□□□ 0.82
SMG6-212ENST00000573153 IFIT3O14879 490 aaKnown RBP20.18■□□□□ 0.82
SMG6-212ENST00000573153 DYNC1LI2O43237 492 aaPredicted RBP20.18■□□□□ 0.82
SMG6-212ENST00000573153 CD4P01730 458 aa20.18■□□□□ 0.82
SMG6-212ENST00000573153 FSCN1Q16658 493 aaKnown RBP20.18■□□□□ 0.82
SMG6-212ENST00000573153 KIAA1211Q6ZU35 1233 aa20.18■□□□□ 0.82
SMG6-212ENST00000573153 FBXO11Q86XK2 927 aa20.18■□□□□ 0.82
SMG6-212ENST00000573153 GLT1D1Q96MS3 346 aa20.18■□□□□ 0.82
SMG6-212ENST00000573153 VAT1LQ9HCJ6 419 aa20.18■□□□□ 0.82
SMG6-212ENST00000573153 A0A0U1RQG5 324 aaPredicted RBP20.17■□□□□ 0.82
SMG6-212ENST00000573153 HSD17B4P51659 736 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 SHHQ15465 462 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 GPR153Q6NV75 609 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 CCDC62Q6P9F0 684 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 COPS5Q92905 334 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 WDR11Q9BZH6 1224 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 SPC25Q9HBM1 224 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 SCN10AQ9Y5Y9 1956 aa20.17■□□□□ 0.82
SMG6-212ENST00000573153 SH2B2O14492 632 aaPredicted RBP20.16■□□□□ 0.82
SMG6-212ENST00000573153 ZBTB5O15062 677 aa20.16■□□□□ 0.82
SMG6-212ENST00000573153 WTAPQ15007 396 aa20.16■□□□□ 0.82
SMG6-212ENST00000573153 CREB3L3Q68CJ9 461 aa20.16■□□□□ 0.82
SMG6-212ENST00000573153 RALYLQ86SE5 291 aaKnown RBP20.16■□□□□ 0.82
SMG6-212ENST00000573153 PIGSQ96S52 555 aa20.16■□□□□ 0.82
SMG6-212ENST00000573153 LBHD1Q9BQE6 289 aaPredicted RBP20.16■□□□□ 0.82
SMG6-212ENST00000573153 PRKAG2Q9UGJ0 569 aa20.16■□□□□ 0.82
SMG6-212ENST00000573153 TMEM67Q5HYA8 995 aa20.15■□□□□ 0.82
SMG6-212ENST00000573153 VWCEQ96DN2 955 aa20.15■□□□□ 0.82
SMG6-212ENST00000573153 MTA3Q9BTC8 594 aa20.15■□□□□ 0.82
SMG6-212ENST00000573153 AMNQ9BXJ7 453 aa20.15■□□□□ 0.82
SMG6-212ENST00000573153 MRPL11Q9Y3B7 192 aaKnown RBP20.15■□□□□ 0.82
SMG6-212ENST00000573153 KIAA1217Q5T5P2 1943 aa20.15■□□□□ 0.82
SMG6-212ENST00000573153 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
SMG6-212ENST00000573153 RGS20O76081 388 aa20.14■□□□□ 0.81
SMG6-212ENST00000573153 PSMC6P62333 389 aa20.14■□□□□ 0.81
SMG6-212ENST00000573153 PURAQ00577 322 aaKnown RBP20.14■□□□□ 0.81
SMG6-212ENST00000573153 Q7L0L9 218 aa20.14■□□□□ 0.81
SMG6-212ENST00000573153 MYL10Q9BUA6 226 aa20.14■□□□□ 0.81
SMG6-212ENST00000573153 TMEM39AQ9NV64 488 aa20.14■□□□□ 0.81
SMG6-212ENST00000573153 COL6A3P12111 3177 aa20.14■□□□□ 0.81
SMG6-212ENST00000573153 PRC1O43663 620 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 CABYRO75952 493 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 PDE4DQ08499 809 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 NOL8Q76FK4 1167 aaKnown RBP20.13■□□□□ 0.81
SMG6-212ENST00000573153 C16orf59Q7L2K0 433 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms