RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 FSCN1Q16658 493 aaKnown RBP20.29■□□□□ 0.84
LITAF-211ENST00000572255 TMEM63BQ5T3F8 832 aa20.29■□□□□ 0.84
LITAF-211ENST00000572255 TBX21Q9UL17 535 aa20.29■□□□□ 0.84
LITAF-211ENST00000572255 RAD50Q92878 1312 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 EPHB4P54760 987 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 RPS6P62753 249 aaKnown RBP20.28■□□□□ 0.84
LITAF-211ENST00000572255 FPGSQ05932 587 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 USH1GQ495M9 461 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 ASPRV1Q53RT3 343 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 FAM109BQ6ICB4 259 aaPredicted RBP20.28■□□□□ 0.84
LITAF-211ENST00000572255 CXCL17Q6UXB2 119 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 KIAA1211Q6ZU35 1233 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 UBAC1Q9BSL1 405 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 Q9Y3F1 56 aa20.28■□□□□ 0.84
LITAF-211ENST00000572255 CABYRO75952 493 aa20.27■□□□□ 0.84
LITAF-211ENST00000572255 TIMP1P01033 207 aa20.27■□□□□ 0.84
LITAF-211ENST00000572255 CDC37Q16543 378 aaPredicted RBP20.27■□□□□ 0.84
LITAF-211ENST00000572255 RUFY2Q8WXA3 655 aa20.27■□□□□ 0.84
LITAF-211ENST00000572255 MYH6P13533 1939 aa20.27■□□□□ 0.84
LITAF-211ENST00000572255 ZEB2O60315 1214 aa20.26■□□□□ 0.83
LITAF-211ENST00000572255 CHMLP26374 656 aa20.26■□□□□ 0.83
LITAF-211ENST00000572255 DUSP28Q4G0W2 176 aa20.26■□□□□ 0.83
LITAF-211ENST00000572255 FAM126BQ8IXS8 530 aa20.26■□□□□ 0.83
LITAF-211ENST00000572255 ADGRF4Q8IZF3 695 aa20.26■□□□□ 0.83
LITAF-211ENST00000572255 WDR11Q9BZH6 1224 aa20.26■□□□□ 0.83
LITAF-211ENST00000572255 TLR3O15455 904 aaKnown RBP20.25■□□□□ 0.83
LITAF-211ENST00000572255 PARP1P09874 1014 aaKnown RBP20.25■□□□□ 0.83
LITAF-211ENST00000572255 PDE4DQ08499 809 aa20.25■□□□□ 0.83
LITAF-211ENST00000572255 IFIT1BQ5T764 474 aaKnown RBP20.25■□□□□ 0.83
LITAF-211ENST00000572255 SLC43A3Q8NBI5 491 aa20.25■□□□□ 0.83
LITAF-211ENST00000572255 RGS22Q8NE09 1264 aa20.25■□□□□ 0.83
LITAF-211ENST00000572255 DNERQ8NFT8 737 aa20.25■□□□□ 0.83
LITAF-211ENST00000572255 RNPC3Q96LT9 517 aaKnown RBP20.25■□□□□ 0.83
LITAF-211ENST00000572255 MPHOSPH6Q99547 160 aaKnown RBP20.25■□□□□ 0.83
LITAF-211ENST00000572255 STXBP5LQ9Y2K9 1186 aa20.25■□□□□ 0.83
LITAF-211ENST00000572255 ABCB11O95342 1321 aa20.25■□□□□ 0.83
LITAF-211ENST00000572255 RBM47A0AV96 593 aaKnown RBP20.24■□□□□ 0.83
LITAF-211ENST00000572255 EDNRBP24530 442 aa20.24■□□□□ 0.83
LITAF-211ENST00000572255 PTH1RQ03431 593 aa20.24■□□□□ 0.83
LITAF-211ENST00000572255 ITGA7Q13683 1181 aa20.24■□□□□ 0.83
LITAF-211ENST00000572255 MFSD5Q6N075 450 aa20.24■□□□□ 0.83
LITAF-211ENST00000572255 CYB5R4Q7L1T6 521 aa20.24■□□□□ 0.83
LITAF-211ENST00000572255 GRIN2DO15399 1336 aa20.24■□□□□ 0.83
LITAF-211ENST00000572255 DHX16O60231 1041 aaKnown RBP20.23■□□□□ 0.83
LITAF-211ENST00000572255 CD4P01730 458 aa20.23■□□□□ 0.83
LITAF-211ENST00000572255 SMAD3P84022 425 aaKnown RBP20.23■□□□□ 0.83
LITAF-211ENST00000572255 SEC23AQ15436 765 aa20.23■□□□□ 0.83
LITAF-211ENST00000572255 QRICH1Q2TAL8 776 aa20.23■□□□□ 0.83
LITAF-211ENST00000572255 ZNF697Q5TEC3 545 aa20.23■□□□□ 0.83
LITAF-211ENST00000572255 FAM161BQ96MY7 647 aa20.23■□□□□ 0.83
LITAF-211ENST00000572255 JMJD4Q9H9V9 463 aa20.23■□□□□ 0.83
LITAF-211ENST00000572255 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
LITAF-211ENST00000572255 U3KPZ7 1027 aaPredicted RBP20.23■□□□□ 0.83
LITAF-211ENST00000572255 B4DLN1 442 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 CYP21A2P08686 494 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 MRPL12P52815 198 aaKnown RBP20.22■□□□□ 0.83
LITAF-211ENST00000572255 TRDNQ13061 729 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 FBXO11Q86XK2 927 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 SCFD2Q8WU76 684 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 TBC1D5Q92609 795 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 GUCD1Q96NT3 240 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 PPP1R12CQ9BZL4 782 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 MAF1Q9H063 256 aa20.22■□□□□ 0.83
LITAF-211ENST00000572255 SGSM2O43147 1006 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 PSMC6P62333 389 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 PPIGQ13427 754 aaKnown RBP eCLIP20.21■□□□□ 0.83
LITAF-211ENST00000572255 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 STAG2Q8N3U4 1231 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 SLC17A8Q8NDX2 589 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 OR6J1Q8NGC5 347 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 SEZ6LQ9BYH1 1024 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
LITAF-211ENST00000572255 NKRFO15226 690 aaKnown RBP eCLIP20.2■□□□□ 0.82
LITAF-211ENST00000572255 CSF2RAP15509 400 aa20.2■□□□□ 0.82
LITAF-211ENST00000572255 CPT1AP50416 773 aa20.2■□□□□ 0.82
LITAF-211ENST00000572255 MCF2L2Q86YR7 1114 aa20.2■□□□□ 0.82
LITAF-211ENST00000572255 TMEM199Q8N511 208 aa20.2■□□□□ 0.82
LITAF-211ENST00000572255 SYTL5Q8TDW5 730 aaPredicted RBP20.2■□□□□ 0.82
LITAF-211ENST00000572255 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.2■□□□□ 0.82
LITAF-211ENST00000572255 TRPV6Q9H1D0 765 aa20.2■□□□□ 0.82
LITAF-211ENST00000572255 COL20A1Q9P218 1284 aa20.2■□□□□ 0.82
LITAF-211ENST00000572255 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
LITAF-211ENST00000572255 TAF6LQ9Y6J9 622 aa20.2■□□□□ 0.82
LITAF-211ENST00000572255 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
LITAF-211ENST00000572255 MYL3P08590 195 aa20.19■□□□□ 0.82
LITAF-211ENST00000572255 CYP2C18P33260 490 aa20.19■□□□□ 0.82
LITAF-211ENST00000572255 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
LITAF-211ENST00000572255 C16orf59Q7L2K0 433 aa20.19■□□□□ 0.82
LITAF-211ENST00000572255 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
LITAF-211ENST00000572255 TAAR1Q96RJ0 339 aa20.19■□□□□ 0.82
LITAF-211ENST00000572255 MAD2L2Q9UI95 211 aa20.19■□□□□ 0.82
LITAF-211ENST00000572255 A0A0C4DFX4 3053 aa20.18■□□□□ 0.82
LITAF-211ENST00000572255 E7EWF7 191 aa20.18■□□□□ 0.82
LITAF-211ENST00000572255 IFIT3O14879 490 aaKnown RBP20.18■□□□□ 0.82
LITAF-211ENST00000572255 B4GALT4O60513 344 aa20.18■□□□□ 0.82
LITAF-211ENST00000572255 TXNP10599 105 aaKnown RBP20.18■□□□□ 0.82
LITAF-211ENST00000572255 TMEM240Q5SV17 173 aa20.18■□□□□ 0.82
LITAF-211ENST00000572255 NSUN6Q8TEA1 469 aaKnown RBP20.18■□□□□ 0.82
LITAF-211ENST00000572255 COPS5Q92905 334 aa20.18■□□□□ 0.82
LITAF-211ENST00000572255 AMNQ9BXJ7 453 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms