RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 DPP9Q86TI2 863 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 MSL3Q8N5Y2 521 aaKnown RBP10.15□□□□□ -0.78
SMG6-210ENST00000572205 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 TCEANC2Q96MN5 208 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 TRERF1Q96PN7 1200 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 LRRC2Q9BYS8 371 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 AGXT2Q9BYV1 514 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 BIN2Q9UBW5 565 aaPredicted RBP10.15□□□□□ -0.78
SMG6-210ENST00000572205 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 SNX14Q9Y5W7 946 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 MYH7BA7E2Y1 1941 aa10.15□□□□□ -0.79
SMG6-210ENST00000572205 CHD9Q3L8U1 2897 aa10.15□□□□□ -0.79
SMG6-210ENST00000572205 FRMPD4Q14CM0 1322 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 CNTNAP5Q8WYK1 1306 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 SYNRGQ9UMZ2 1314 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 WDR81Q562E7 1941 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 MYADML2A6NDP7 307 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 IFIT3O14879 490 aaKnown RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 DDAH1O94760 285 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 PLEKHA8P1O95397 391 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 PARP1P09874 1014 aaKnown RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 CPA1P15085 419 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 LIFRP42702 1097 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 NKX3-2P78367 333 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 WTAPQ15007 396 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 TMEM67Q5HYA8 995 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 PPP1R15BQ5SWA1 713 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 MFSD14CQ5VZR4 134 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 CCSAPQ6IQ19 270 aaPredicted RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 ARMCX2Q7L311 632 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 RALYLQ86SE5 291 aaKnown RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 CCAR1Q8IX12 1150 aaKnown RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 TBC1D5Q92609 795 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 PAWRQ96IZ0 340 aaKnown RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 MAP3K14Q99558 947 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 PRO3102Q9H379 93 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 FAM217BQ9NTX9 383 aaPredicted RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.14□□□□□ -0.79
SMG6-210ENST00000572205 BRPF3Q9ULD4 1205 aa10.14□□□□□ -0.79
SMG6-210ENST00000572205 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.13□□□□□ -0.79
SMG6-210ENST00000572205 KLRF2D3W0D1 207 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
SMG6-210ENST00000572205 RXRAP19793 462 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 MCM5P33992 734 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 ALDH5A1P51649 535 aaPredicted RBP10.13□□□□□ -0.79
SMG6-210ENST00000572205 RPS6P62753 249 aaKnown RBP10.13□□□□□ -0.79
SMG6-210ENST00000572205 TRDNQ13061 729 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 IKQ13123 557 aaPredicted RBP10.13□□□□□ -0.79
SMG6-210ENST00000572205 SNX17Q15036 470 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 ANO1Q5XXA6 986 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 TAPT1Q6NXT6 567 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 APOA5Q6Q788 366 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 FBXL16Q8N461 479 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 TMEM87BQ96K49 555 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 SPZ1Q9BXG8 430 aa10.13□□□□□ -0.79
SMG6-210ENST00000572205 UPF3AQ9H1J1 476 aaKnown RBP10.13□□□□□ -0.79
SMG6-210ENST00000572205 CWC22Q9HCG8 908 aaKnown RBP10.13□□□□□ -0.79
SMG6-210ENST00000572205 SIP14410 1827 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 DPYSL4O14531 572 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 ZBTB5O15062 677 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 CAPN2P17655 700 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMG6-210ENST00000572205 HSD17B4P51659 736 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 BAATQ14032 418 aaPredicted RBP10.12□□□□□ -0.79
SMG6-210ENST00000572205 LRRC41Q15345 812 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 USH1GQ495M9 461 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 PRPF38BQ5VTL8 546 aaKnown RBP10.12□□□□□ -0.79
SMG6-210ENST00000572205 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 RAB11FIP4Q86YS3 637 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 ANKRD35Q8N283 1001 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 SRBD1Q8N5C6 995 aaKnown RBP10.12□□□□□ -0.79
SMG6-210ENST00000572205 RGS22Q8NE09 1264 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 KLHDC9Q8NEP7 349 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 NEK1Q96PY6 1258 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 PIGSQ96S52 555 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
SMG6-210ENST00000572205 ISY1Q9ULR0 285 aaKnown RBP10.12□□□□□ -0.79
SMG6-210ENST00000572205 GNEQ9Y223 722 aaKnown RBP10.12□□□□□ -0.79
SMG6-210ENST00000572205 ABCB11O95342 1321 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 EYSQ5T1H1 3165 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 RBM47A0AV96 593 aaKnown RBP10.11□□□□□ -0.79
SMG6-210ENST00000572205 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 DNM1LO00429 736 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 MSCO60682 206 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 AKR1A1P14550 325 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 CST5P28325 142 aaPredicted RBP10.11□□□□□ -0.79
SMG6-210ENST00000572205 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 EVCP57679 992 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 LRRC26Q2I0M4 334 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 NSMFQ6X4W1 530 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 TMTC3Q6ZXV5 915 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 DHX32Q7L7V1 743 aaKnown RBP10.11□□□□□ -0.79
SMG6-210ENST00000572205 FBXO16Q8IX29 292 aaPredicted RBP10.11□□□□□ -0.79
SMG6-210ENST00000572205 SYTL5Q8TDW5 730 aaPredicted RBP10.11□□□□□ -0.79
SMG6-210ENST00000572205 PHF12Q96QT6 1004 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms