RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 ABCB11O95342 1321 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 CCDC69A6NI79 296 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 ASB14A6NK59 587 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 ZBTB5O15062 677 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 CTAGE5O15320 804 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 EVI5O60447 810 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 DDAH1O94760 285 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 TMTC2Q8N394 836 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 ARRDC4Q8NCT1 418 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 RGS22Q8NE09 1264 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 KLHDC9Q8NEP7 349 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 SYTL5Q8TDW5 730 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 PNMA2Q9UL42 364 aa11.9□□□□□ -0.5
GTF3C1-213ENST00000571886 SYNRGQ9UMZ2 1314 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 hCG_1642624A0A1W2PR95 340 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 DUSP11O75319 330 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 SMPD1P17405 629 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 SYN1P17600 705 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 SGMS1Q86VZ5 419 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 JAKMIP1Q96N16 626 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 MAP3K14Q99558 947 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 USP26Q9BXU7 913 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 ZMYND8Q9ULU4 1186 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 GNEQ9Y223 722 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 MRPL11Q9Y3B7 192 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 PCDHA1Q9Y5I3 950 aa11.89□□□□□ -0.51
GTF3C1-213ENST00000571886 PNMA6FA0A0J9YX94 578 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 KBTBD13C9JR72 458 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 CFBP00751 764 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 EDNRBP24530 442 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 GJA9P57773 515 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 BEX3Q00994 111 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 TNFAIP2Q03169 654 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 KCNA10Q16322 511 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 SLC39A5Q6ZMH5 540 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 FANCBQ8NB91 859 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 CTCFLQ8NI51 663 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 UPF3AQ9H1J1 476 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 ADD3Q9UEY8 706 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 PHF24Q9UPV7 400 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 SLC12A7Q9Y666 1083 aa11.88□□□□□ -0.51
GTF3C1-213ENST00000571886 DYNC1LI2O43237 492 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 REC8O95072 547 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 C6orf222P0C671 652 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 HOXA13P31271 388 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 HSD17B4P51659 736 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 RTP1P59025 263 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 KRT32Q14532 448 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 IQSEC1Q6DN90 963 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 Q6ZUG5 572 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 NOL8Q76FK4 1167 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 RNF180Q86T96 592 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 MICU3Q86XE3 530 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 MCF2L2Q86YR7 1114 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 DNERQ8NFT8 737 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 COPS5Q92905 334 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 SPZ1Q9BXG8 430 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
GTF3C1-213ENST00000571886 KIAA1217Q5T5P2 1943 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 A0A1W2PQ45 241 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 A0A1W2PQY0 241 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 RBM47A0AV96 593 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 ARIH2O95376 493 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 SMARCA1P28370 1054 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 CDC27P30260 824 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 KIF5BP33176 963 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 ACLYP53396 1101 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 NKX3-2P78367 333 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 GHRHRQ02643 423 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 PDE4DQ08499 809 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 APOBRQ0VD83 1088 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 TRIM60Q495X7 471 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 BLOC1S2Q6QNY1 142 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 WDR11Q9BZH6 1224 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 NR2E3Q9Y5X4 410 aa11.86□□□□□ -0.51
GTF3C1-213ENST00000571886 LOC102724159A0A0B4J2E5 919 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 SEC24BO95487 1268 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 ASGR1P07306 291 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 CALM1P0DP23 149 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 CALM2P0DP24 149 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 CALM3P0DP25 149 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 CASTP20810 708 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 CST5P28325 142 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 GNAQP50148 359 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 FUT2Q10981 343 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms