RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SLC39A5Q6ZMH5 540 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 NOL8Q76FK4 1167 aaKnown RBP16.92■□□□□ 0.3
LITAF-208ENST00000571627 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 MORC4Q8TE76 937 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 PIGSQ96S52 555 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 COL20A1Q9P218 1284 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
LITAF-208ENST00000571627 ATP11BQ9Y2G3 1177 aa16.92■□□□□ 0.3
LITAF-208ENST00000571627 LTBP2Q14767 1821 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 ZBTB5O15062 677 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 RXRAP19793 462 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 KLHDC9Q8NEP7 349 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 TMEM87BQ96K49 555 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 TCEANC2Q96MN5 208 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 AMNQ9BXJ7 453 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 UPF3AQ9H1J1 476 aaKnown RBP16.91■□□□□ 0.3
LITAF-208ENST00000571627 RIOX1Q9H6W3 641 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
LITAF-208ENST00000571627 MRPL11Q9Y3B7 192 aaKnown RBP16.91■□□□□ 0.3
LITAF-208ENST00000571627 KIAA1217Q5T5P2 1943 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 OPLAHO14841 1288 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 DDAH1O94760 285 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 SMPD1P17405 629 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 ACLYP53396 1101 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 GJA9P57773 515 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 KCNA10Q16322 511 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 TRIM60Q495X7 471 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 CCSAPQ6IQ19 270 aaPredicted RBP16.9■□□□□ 0.3
LITAF-208ENST00000571627 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 SYTL5Q8TDW5 730 aaPredicted RBP16.9■□□□□ 0.3
LITAF-208ENST00000571627 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 PRO3102Q9H379 93 aa16.9■□□□□ 0.3
LITAF-208ENST00000571627 CTAGE5O15320 804 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 REC8O95072 547 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 CFBP00751 764 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 EDNRBP24530 442 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
LITAF-208ENST00000571627 MAGEA10P43363 369 aaPredicted RBP16.89■□□□□ 0.29
LITAF-208ENST00000571627 BEX3Q00994 111 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 PDE4DQ08499 809 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 SNX17Q15036 470 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 TLK2Q86UE8 772 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 DNERQ8NFT8 737 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
LITAF-208ENST00000571627 NEK1Q96PY6 1258 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 TAAR1Q96RJ0 339 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 TSEN34Q9BSV6 310 aaKnown RBP16.89■□□□□ 0.29
LITAF-208ENST00000571627 SPC25Q9HBM1 224 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
LITAF-208ENST00000571627 PCDHA1Q9Y5I3 950 aa16.89■□□□□ 0.29
LITAF-208ENST00000571627 LOC102724159A0A0B4J2E5 919 aa16.88■□□□□ 0.29
LITAF-208ENST00000571627 PLEKHA8P1O95397 391 aa16.88■□□□□ 0.29
LITAF-208ENST00000571627 PWP2Q15269 919 aaKnown RBP16.88■□□□□ 0.29
LITAF-208ENST00000571627 GNASQ5JWF2 1037 aa16.88■□□□□ 0.29
LITAF-208ENST00000571627 CMTR1Q8N1G2 835 aaKnown RBP16.88■□□□□ 0.29
LITAF-208ENST00000571627 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 DYNC1LI2O43237 492 aaPredicted RBP16.87■□□□□ 0.29
LITAF-208ENST00000571627 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
LITAF-208ENST00000571627 ASGR1P07306 291 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 HOXA13P31271 388 aaPredicted RBP16.87■□□□□ 0.29
LITAF-208ENST00000571627 KIF5BP33176 963 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 LIFRP42702 1097 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
LITAF-208ENST00000571627 KRT32Q14532 448 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 TSGA10IPQ3SY00 556 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 IQSEC1Q6DN90 963 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 GDF15Q99988 308 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 SPZ1Q9BXG8 430 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 PRDM5Q9NQX1 630 aaPredicted RBP16.87■□□□□ 0.29
LITAF-208ENST00000571627 STARD7Q9NQZ5 370 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
LITAF-208ENST00000571627 MOXD2PA6NHM9 499 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 PQBP1O60828 265 aaKnown RBP16.86■□□□□ 0.29
LITAF-208ENST00000571627 CPA1P15085 419 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 EIF2AK2P19525 551 aaKnown RBP16.86■□□□□ 0.29
LITAF-208ENST00000571627 HSD17B4P51659 736 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
LITAF-208ENST00000571627 TLE2Q04725 743 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 FSCN1Q16658 493 aaKnown RBP16.86■□□□□ 0.29
LITAF-208ENST00000571627 C1orf53Q5VUE5 145 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 SRBD1Q8N5C6 995 aaKnown RBP16.86■□□□□ 0.29
LITAF-208ENST00000571627 PCSK9Q8NBP7 692 aaKnown RBP16.86■□□□□ 0.29
LITAF-208ENST00000571627 RMDN3Q96TC7 470 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
LITAF-208ENST00000571627 WDR11Q9BZH6 1224 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
LITAF-208ENST00000571627 RBM47A0AV96 593 aaKnown RBP16.85■□□□□ 0.29
LITAF-208ENST00000571627 HSPA4P34932 840 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 NKX3-2P78367 333 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 DHX32Q7L7V1 743 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms