RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TANGO6Q9C0B7 1094 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 USP15Q9Y4E8 981 aaPredicted RBP8.54□□□□□ -1.04
CHD3-213ENST00000571249 MYO10Q9HD67 2058 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 BRD1O95696 1058 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 MAP4K4O95819 1239 aaPredicted RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 NDUFV1P49821 464 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 NKX3-2P78367 333 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 MFSD10Q14728 455 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 FSCN1Q16658 493 aaKnown RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 SPTY2D1Q68D10 685 aaPredicted RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 MAMDC4Q6UXC1 1216 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 NOL8Q76FK4 1167 aaKnown RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 KREMEN2Q8NCW0 462 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 TSR2Q969E8 191 aaKnown RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 PHF7Q9BWX1 381 aaPredicted RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 SIL1Q9H173 461 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 DHX36Q9H2U1 1008 aaKnown RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 BICC1Q9H694 974 aaKnown RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.53□□□□□ -1.04
CHD3-213ENST00000571249 IGSF10Q6WRI0 2623 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 ZNF462Q96JM2 2506 aa8.53□□□□□ -1.04
CHD3-213ENST00000571249 HECTD1Q9ULT8 2610 aa8.52□□□□□ -1.04
CHD3-213ENST00000571249 ITPR1Q14643 2758 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 A0A1W2PRG0 241 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 A6NJR5 290 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 GRM6O15303 877 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 DYNC1LI2O43237 492 aaPredicted RBP8.52□□□□□ -1.05
CHD3-213ENST00000571249 PPM1JQ5JR12 505 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 LRSAM1Q6UWE0 723 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.52□□□□□ -1.053e-11■■■■■ 34.4
CHD3-213ENST00000571249 MAPKAPK5Q8IW41 473 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 TMEM192Q8IY95 271 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 CCDC82Q8N4S0 544 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 ANKRD44Q8N8A2 993 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 RETREG2Q8NC44 543 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 SMRP1Q8NCR6 262 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 FLCNQ8NFG4 579 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 SEMA4AQ9H3S1 761 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 SAP30BPQ9UHR5 308 aaKnown RBP8.52□□□□□ -1.05
CHD3-213ENST00000571249 PCDHB8Q9UN66 801 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 INSL6Q9Y581 213 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 PCDHB13Q9Y5F0 798 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 LOC400499M0QZD8 3231 aa8.52□□□□□ -1.05
CHD3-213ENST00000571249 EYA2O00167 538 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 FLOT1O75955 427 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 SLC25A27O95847 323 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 LDHCP07864 332 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 NBPF7P0C2Y1 421 aaPredicted RBP8.51□□□□□ -1.05
CHD3-213ENST00000571249 SUPT20HL2P0C7V6 817 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 CLCN5P51795 746 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 ATP2B3Q16720 1220 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
CHD3-213ENST00000571249 CWF19L1Q69YN2 538 aaKnown RBP8.51□□□□□ -1.05
CHD3-213ENST00000571249 CCDC105Q8IYK2 499 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 MSL3Q8N5Y2 521 aaKnown RBP8.51□□□□□ -1.05
CHD3-213ENST00000571249 MB21D1Q8N884 522 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 DTWD2Q8NBA8 298 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 TGFBRAP1Q8WUH2 860 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 RIN2Q8WYP3 895 aaPredicted RBP8.51□□□□□ -1.05
CHD3-213ENST00000571249 KATNBL1Q9H079 304 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
CHD3-213ENST00000571249 ZMIZ1Q9ULJ6 1067 aa8.51□□□□□ -1.05
CHD3-213ENST00000571249 DDX49Q9Y6V7 483 aaKnown RBP8.51□□□□□ -1.05
CHD3-213ENST00000571249 ATG2AQ2TAZ0 1938 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 PITPNM1O00562 1244 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 TRAK2O60296 914 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 NBNO60934 754 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 ALDH1L1O75891 902 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 GUCY1A2P33402 732 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 GSTO1P78417 241 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 TNFAIP2Q03169 654 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 COASYQ13057 564 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 RASGRF1Q13972 1273 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 WDR43Q15061 677 aaKnown RBP eCLIP8.5□□□□□ -1.05
CHD3-213ENST00000571249 CCDC102BQ68D86 513 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 TLK2Q86UE8 772 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 FBXO11Q86XK2 927 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 RIOX2Q8IUF8 465 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 KCTD17Q8N5Z5 321 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 SUMF1Q8NBK3 374 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 SP7Q8TDD2 431 aaPredicted RBP8.5□□□□□ -1.05
CHD3-213ENST00000571249 FGD4Q96M96 766 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 MFSD1Q9H3U5 465 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 ABHD16BQ9H3Z7 469 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 ANGPTL2Q9UKU9 493 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 BARX2Q9UMQ3 279 aaPredicted RBP8.5□□□□□ -1.05
CHD3-213ENST00000571249 ADAMTS8Q9UP79 889 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 GNEQ9Y223 722 aaKnown RBP8.5□□□□□ -1.05
CHD3-213ENST00000571249 MCM3APO60318 1980 aa8.5□□□□□ -1.05
CHD3-213ENST00000571249 RALGAPA2Q2PPJ7 1873 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 APAF1O14727 1248 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 PROS1P07225 676 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 NPR3P17342 541 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 SMPD1P17405 629 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 SDHBP21912 280 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 ADORA1P30542 326 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 STAT3P40763 770 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 MLLT3P42568 568 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms