RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 PGK1P00558 417 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 HMGB1P09429 215 aaKnown RBP20.95■□□□□ 0.94
LITAF-204ENST00000570798 CALM1P0DP23 149 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 CALM2P0DP24 149 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 CALM3P0DP25 149 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 TAPT1Q6NXT6 567 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 HOMER1Q86YM7 354 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 MCF2L2Q86YR7 1114 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 SPZ1Q9BXG8 430 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 SENP6Q9GZR1 1112 aaPredicted RBP20.95■□□□□ 0.94
LITAF-204ENST00000570798 PCDHA1Q9Y5I3 950 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 NR2E3Q9Y5X4 410 aa20.95■□□□□ 0.94
LITAF-204ENST00000570798 PNMA6FA0A0J9YX94 578 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 EDNRBP24530 442 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 LRRC26Q2I0M4 334 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 RNF180Q86T96 592 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 KLHDC9Q8NEP7 349 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 SYTL5Q8TDW5 730 aaPredicted RBP20.94■□□□□ 0.94
LITAF-204ENST00000570798 TCEANC2Q96MN5 208 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 UPF3AQ9H1J1 476 aaKnown RBP20.94■□□□□ 0.94
LITAF-204ENST00000570798 VTA1Q9NP79 307 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 SLC12A7Q9Y666 1083 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 SYNRGQ9UMZ2 1314 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 KIAA1217Q5T5P2 1943 aa20.94■□□□□ 0.94
LITAF-204ENST00000570798 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.93■□□□□ 0.94
LITAF-204ENST00000570798 RXRAP19793 462 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 GNAQP50148 359 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 NKX3-2P78367 333 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 TRAF1Q13077 416 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 IQSEC1Q6DN90 963 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 CCSAPQ6IQ19 270 aaPredicted RBP20.93■□□□□ 0.94
LITAF-204ENST00000570798 EEPD1Q7L9B9 569 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 FBXO16Q8IX29 292 aaPredicted RBP20.93■□□□□ 0.94
LITAF-204ENST00000570798 SRBD1Q8N5C6 995 aaKnown RBP20.93■□□□□ 0.94
LITAF-204ENST00000570798 LZTS2Q9BRK4 669 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 PDGFCQ9NRA1 345 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 COL20A1Q9P218 1284 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 PHF24Q9UPV7 400 aa20.93■□□□□ 0.94
LITAF-204ENST00000570798 GNEQ9Y223 722 aaKnown RBP20.93■□□□□ 0.94
LITAF-204ENST00000570798 PLEKHA8P1O95397 391 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
LITAF-204ENST00000570798 CST5P28325 142 aaPredicted RBP20.92■□□□□ 0.94
LITAF-204ENST00000570798 ADCYAP1R1P41586 468 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 HSD17B4P51659 736 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 GJA9P57773 515 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 TNFAIP2Q03169 654 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 APOA5Q6Q788 366 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 SAMD3Q8N6K7 520 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 FANCBQ8NB91 859 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 TAAR1Q96RJ0 339 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 TSEN34Q9BSV6 310 aaKnown RBP20.92■□□□□ 0.94
LITAF-204ENST00000570798 USP26Q9BXU7 913 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
LITAF-204ENST00000570798 BRPF3Q9ULD4 1205 aa20.92■□□□□ 0.94
LITAF-204ENST00000570798 RBM47A0AV96 593 aaKnown RBP20.91■□□□□ 0.94
LITAF-204ENST00000570798 CTAGE5O15320 804 aa20.91■□□□□ 0.94
LITAF-204ENST00000570798 CPA1P15085 419 aa20.91■□□□□ 0.94
LITAF-204ENST00000570798 IRX5P78411 483 aaPredicted RBP20.91■□□□□ 0.94
LITAF-204ENST00000570798 SLC39A5Q6ZMH5 540 aa20.91■□□□□ 0.94
LITAF-204ENST00000570798 RAB11FIP4Q86YS3 637 aa20.91■□□□□ 0.94
LITAF-204ENST00000570798 C7orf61Q8IZ16 206 aa20.91■□□□□ 0.94
LITAF-204ENST00000570798 JAKMIP1Q96N16 626 aaKnown RBP20.91■□□□□ 0.94
LITAF-204ENST00000570798 MYADML2A6NDP7 307 aa20.9■□□□□ 0.94
LITAF-204ENST00000570798 B4DLN1 442 aa20.9■□□□□ 0.94
LITAF-204ENST00000570798 CFBP00751 764 aa20.9■□□□□ 0.94
LITAF-204ENST00000570798 SMPD1P17405 629 aa20.9■□□□□ 0.94
LITAF-204ENST00000570798 MRPL12P52815 198 aaKnown RBP20.9■□□□□ 0.94
LITAF-204ENST00000570798 SNX17Q15036 470 aa20.9■□□□□ 0.94
LITAF-204ENST00000570798 FBXL16Q8N461 479 aa20.9■□□□□ 0.94
LITAF-204ENST00000570798 RRP36Q96EU6 259 aaKnown RBP20.9■□□□□ 0.94
LITAF-204ENST00000570798 MPHOSPH6Q99547 160 aaKnown RBP20.9■□□□□ 0.94
LITAF-204ENST00000570798 Q9Y3F1 56 aa20.9■□□□□ 0.94
LITAF-204ENST00000570798 ATN1P54259 1190 aaPredicted RBP20.89■□□□□ 0.93
LITAF-204ENST00000570798 PDE4DQ08499 809 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 TMEM63BQ5T3F8 832 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 C1orf53Q5VUE5 145 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 BLOC1S2Q6QNY1 142 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 SYNE3Q6ZMZ3 975 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 TMTC3Q6ZXV5 915 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 MICU3Q86XE3 530 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 CMTR1Q8N1G2 835 aaKnown RBP20.89■□□□□ 0.93
LITAF-204ENST00000570798 NSUN6Q8TEA1 469 aaKnown RBP20.89■□□□□ 0.93
LITAF-204ENST00000570798 FERMT2Q96AC1 680 aa20.89■□□□□ 0.93
LITAF-204ENST00000570798 MOXD2PA6NHM9 499 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 C6orf222P0C671 652 aaPredicted RBP20.88■□□□□ 0.93
LITAF-204ENST00000570798 RPS6KB1P23443 525 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 ACLYP53396 1101 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 KCNA10Q16322 511 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 PIBF1Q8WXW3 757 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 IWS1Q96ST2 819 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 RMDN3Q96TC7 470 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 AGXT2Q9BYV1 514 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 SPC25Q9HBM1 224 aa20.88■□□□□ 0.93
LITAF-204ENST00000570798 A0A1W2PQ45 241 aaPredicted RBP20.87■□□□□ 0.93
LITAF-204ENST00000570798 A0A1W2PQY0 241 aa20.87■□□□□ 0.93
LITAF-204ENST00000570798 ZBTB43O43298 467 aa20.87■□□□□ 0.93
LITAF-204ENST00000570798 PTGS1P23219 599 aa20.87■□□□□ 0.93
LITAF-204ENST00000570798 PSMA5P28066 241 aa20.87■□□□□ 0.93
LITAF-204ENST00000570798 RCAN1P53805 252 aa20.87■□□□□ 0.93
LITAF-204ENST00000570798 RTP1P59025 263 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms