RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 CENPOQ9BU64 300 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 RTFDC1Q9BY42 306 aaPredicted RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 TNMDQ9H2S6 317 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 CLSTN2Q9H4D0 955 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 MSRB2Q9Y3D2 182 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 SCINQ9Y6U3 715 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 ARAP2Q8WZ64 1704 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 ZNF213O14771 459 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 ADD1P35611 737 aaKnown RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 PUM3Q15397 648 aaKnown RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 ZSCAN26Q16670 478 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 ANO6Q4KMQ2 910 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 C1QTNF12Q5T7M4 302 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 LPIN2Q92539 896 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 CSRNP1Q96S65 589 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 RCOR1Q9UKL0 485 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 DDX60Q8IY21 1712 aaKnown RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 CCDC172P0C7W6 258 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 FGFR2P21802 821 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 HAND2P61296 217 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 TAF1CQ15572 869 aaPredicted RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 SLC4A8Q2Y0W8 1093 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 GRAMD1BQ3KR37 738 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 CHST3Q7LGC8 479 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 KIAA0825Q8IV33 1275 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 REXO1L1PQ8IX06 675 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 BICD2Q8TD16 824 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 ZNF396Q96N95 335 aaPredicted RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 TRIM5Q9C035 493 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 NCOA5Q9HCD5 579 aaKnown RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 UBP1Q9NZI7 540 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 CWC15Q9P013 229 aaKnown RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 CARMIL3Q8ND23 1372 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 PIP5K1CO60331 668 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 COQ9O75208 318 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 ST5P78524 1137 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 ERCC6LQ2NKX8 1250 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 SLC9C2Q5TAH2 1124 aa9.06□□□□□ -0.96
TCF4-246ENST00000570287 RALYLQ86SE5 291 aaKnown RBP9.06□□□□□ -0.96
TCF4-246ENST00000570287 RREB1Q92766 1687 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 SPATA31A1Q5TZJ5 1347 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 CICQ96RK0 1608 aaPredicted RBP9.05□□□□□ -0.96
TCF4-246ENST00000570287 MAGEB6P1A0A0J9YX57 407 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 RPS6KA5O75582 802 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 TOMM20Q15388 145 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 DDB1Q16531 1140 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 PARP10Q53GL7 1025 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 DESI1Q6ICB0 168 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 INTS5Q6P9B9 1019 aaKnown RBP9.05□□□□□ -0.96
TCF4-246ENST00000570287 ETFBKMTQ8IXQ9 262 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 SEC16BQ96JE7 1060 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 PIH1D3Q9NQM4 214 aaKnown RBP9.05□□□□□ -0.96
TCF4-246ENST00000570287 SEPT9Q9UHD8 586 aaPredicted RBP9.05□□□□□ -0.96
TCF4-246ENST00000570287 PTCH2Q9Y6C5 1203 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 NRAPQ86VF7 1730 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 SLIT2O94813 1529 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 TMEM229AB2RXF0 380 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 SLC26A4O43511 780 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 SKILP12757 684 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 PHKA1P46020 1223 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 EPHB1P54762 984 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 RAB15P59190 212 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 RAPGEF1Q13905 1077 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 IQCB1Q15051 598 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 CAMK4Q16566 473 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 LHFPL2Q6ZUX7 228 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 FBF1Q8TES7 1133 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 EXOC4Q96A65 974 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 ZBTB9Q96C00 473 aa9.05□□□□□ -0.96
TCF4-246ENST00000570287 ORC3Q9UBD5 711 aaPredicted RBP9.05□□□□□ -0.96
TCF4-246ENST00000570287 SLC5A1P13866 664 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 FDPSP14324 419 aaKnown RBP9.04□□□□□ -0.96
TCF4-246ENST00000570287 ANTXR2P58335 489 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 NFKB2Q00653 900 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 TRDNQ13061 729 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 GPS2Q13227 327 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 DRC7Q8IY82 874 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 CACTIN-AS1Q8N1I8 211 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 UTP14AQ9BVJ6 771 aaKnown RBP9.04□□□□□ -0.96
TCF4-246ENST00000570287 KLF18A0A0U1RQI7 1052 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 IDH1O75874 414 aaKnown RBP9.04□□□□□ -0.96
TCF4-246ENST00000570287 PDE6AP16499 860 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 ATP6V1AP38606 617 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 PCGF5Q86SE9 256 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 LRRN4CLQ8ND94 238 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 EDEM1Q92611 657 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 LRRC27Q9C0I9 530 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 MAPK8IP1Q9UQF2 711 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 RRP15Q9Y3B9 282 aaKnown RBP9.04□□□□□ -0.96
TCF4-246ENST00000570287 ZMYM6O95789 1325 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 ZNF532Q9HCE3 1301 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 TCRBV5S4A2TA0A5A2 114 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 RNF40O75150 1001 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 CRKP46108 304 aa9.04□□□□□ -0.96
TCF4-246ENST00000570287 CRKLP46109 303 aaKnown RBP9.04□□□□□ -0.96
TCF4-246ENST00000570287 ALX1Q15699 326 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms