RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 WDR11Q9BZH6 1224 aa24.8■■□□□ 1.56
PKD1-240ENST00000570253 TRPV6Q9H1D0 765 aa24.8■■□□□ 1.56
PKD1-240ENST00000570253 TSPYL2Q9H2G4 693 aaPredicted RBP24.8■■□□□ 1.56
PKD1-240ENST00000570253 MYO9BQ13459 2157 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 PFKMP08237 780 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 NOVP48745 357 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 PSMC6P62333 389 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 PDE4DQ08499 809 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 MCMDC2Q4G0Z9 681 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 VPS53Q5VIR6 699 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 RASGRP2Q7LDG7 609 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 OR6J1Q8NGC5 347 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 ATXN2LQ8WWM7 1075 aaKnown RBP24.79■■□□□ 1.56
PKD1-240ENST00000570253 NKX2-4Q9H2Z4 354 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 GPCPD1Q9NPB8 672 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 PRDM6Q9NQX0 595 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 TCP11L1Q9NUJ3 509 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 THEGQ9P2T0 379 aa24.79■■□□□ 1.56
PKD1-240ENST00000570253 FRMPD2Q68DX3 1309 aaPredicted RBP24.79■■□□□ 1.56
PKD1-240ENST00000570253 NKRFO15226 690 aaKnown RBP eCLIP24.78■■□□□ 1.56
PKD1-240ENST00000570253 FOXP2O15409 715 aa24.78■■□□□ 1.56
PKD1-240ENST00000570253 MYL3P08590 195 aa24.78■■□□□ 1.56
PKD1-240ENST00000570253 FGRP09769 529 aa24.78■■□□□ 1.56
PKD1-240ENST00000570253 PCP11498 1178 aaKnown RBP24.78■■□□□ 1.56
PKD1-240ENST00000570253 CALML3P27482 149 aa24.78■■□□□ 1.56
PKD1-240ENST00000570253 RNF207Q6ZRF8 634 aa24.78■■□□□ 1.56
PKD1-240ENST00000570253 TMEM47Q9BQJ4 181 aa24.78■■□□□ 1.56
PKD1-240ENST00000570253 ALDH8A1Q9H2A2 487 aaPredicted RBP24.78■■□□□ 1.56
PKD1-240ENST00000570253 CXXC1Q9P0U4 656 aaPredicted RBP24.78■■□□□ 1.56
PKD1-240ENST00000570253 UMODL1Q5DID0 1318 aa24.78■■□□□ 1.56
PKD1-240ENST00000570253 VCANP13611 3396 aa24.77■■□□□ 1.56
PKD1-240ENST00000570253 ACTN1P12814 892 aa24.77■■□□□ 1.56
PKD1-240ENST00000570253 MFAP1P55081 439 aaKnown RBP24.77■■□□□ 1.56
PKD1-240ENST00000570253 PPP2R5BQ15173 497 aa24.77■■□□□ 1.56
PKD1-240ENST00000570253 FAM47CQ5HY64 1035 aa24.77■■□□□ 1.56
PKD1-240ENST00000570253 TTBK2Q6IQ55 1244 aa24.77■■□□□ 1.56
PKD1-240ENST00000570253 TTC14Q96N46 770 aa24.77■■□□□ 1.56
PKD1-240ENST00000570253 MTG1Q9BT17 334 aaPredicted RBP24.77■■□□□ 1.56
PKD1-240ENST00000570253 RNF41Q9H4P4 317 aaPredicted RBP24.77■■□□□ 1.56
PKD1-240ENST00000570253 DDX49Q9Y6V7 483 aaKnown RBP24.77■■□□□ 1.56
PKD1-240ENST00000570253 GRIN2DO15399 1336 aa24.77■■□□□ 1.56
PKD1-240ENST00000570253 NFIBO00712 420 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 KPNA6O60684 536 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 FGAP02671 866 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 PPP2R2DQ66LE6 453 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 MFSD6Q6ZSS7 791 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 PURBQ96QR8 312 aaKnown RBP24.76■■□□□ 1.55
PKD1-240ENST00000570253 WNT8AQ9H1J5 351 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 TNKSO95271 1327 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 ZMYM6O95789 1325 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 SALL3Q9BXA9 1300 aa24.76■■□□□ 1.55
PKD1-240ENST00000570253 LCTP09848 1927 aa24.75■■□□□ 1.55
PKD1-240ENST00000570253 TNFRSF10AO00220 468 aa24.75■■□□□ 1.55
PKD1-240ENST00000570253 DNERQ8NFT8 737 aa24.75■■□□□ 1.55
PKD1-240ENST00000570253 SCFD2Q8WU76 684 aa24.75■■□□□ 1.55
PKD1-240ENST00000570253 PCDHA11Q9Y5I1 949 aa24.75■■□□□ 1.55
PKD1-240ENST00000570253 TRIM6-TRIM34B2RNG4 842 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 PDHBP11177 359 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 PTGS1P23219 599 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 PDE1AP54750 535 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 PURAQ00577 322 aaKnown RBP24.74■■□□□ 1.55
PKD1-240ENST00000570253 RETREG2Q8NC44 543 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 SCLYQ96I15 445 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 NOD1Q9Y239 953 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 WDR19Q8NEZ3 1342 aa24.74■■□□□ 1.55
PKD1-240ENST00000570253 GBF1Q92538 1859 aa24.73■■□□□ 1.55
PKD1-240ENST00000570253 RBM47A0AV96 593 aaKnown RBP24.73■■□□□ 1.55
PKD1-240ENST00000570253 HSPD1P10809 573 aaKnown RBP24.73■■□□□ 1.55
PKD1-240ENST00000570253 ATP2A2P16615 1042 aaKnown RBP24.73■■□□□ 1.55
PKD1-240ENST00000570253 RFC2P35250 354 aa24.73■■□□□ 1.55
PKD1-240ENST00000570253 MRPS5P82675 430 aaKnown RBP24.73■■□□□ 1.55
PKD1-240ENST00000570253 CCDC85BQ15834 202 aaPredicted RBP24.73■■□□□ 1.55
PKD1-240ENST00000570253 GPATCH4Q5T3I0 446 aaKnown RBP24.73■■□□□ 1.55
PKD1-240ENST00000570253 SLC30A10Q6XR72 485 aa24.73■■□□□ 1.55
PKD1-240ENST00000570253 TRMT13Q9NUP7 481 aaKnown RBP24.73■■□□□ 1.55
PKD1-240ENST00000570253 TTC28Q96AY4 2481 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 CCDC171Q6TFL3 1326 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 A0A0D9SFI3 127 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 NT5C2P49902 561 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 RRP1P56182 461 aaKnown RBP24.72■■□□□ 1.55
PKD1-240ENST00000570253 HAND2P61296 217 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 RPS6P62753 249 aaKnown RBP24.72■■□□□ 1.55
PKD1-240ENST00000570253 ZNF543Q08ER8 600 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 CCDC178Q5BJE1 867 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 TMEM63BQ5T3F8 832 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 ESR2Q92731 530 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 FAM227BQ96M60 508 aa24.72■■□□□ 1.55
PKD1-240ENST00000570253 YBX2Q9Y2T7 364 aaKnown RBP24.72■■□□□ 1.55
PKD1-240ENST00000570253 CYP2C9P11712 490 aa24.71■■□□□ 1.55
PKD1-240ENST00000570253 PTPN11Q06124 597 aaPredicted RBP24.71■■□□□ 1.55
PKD1-240ENST00000570253 TTLL4Q14679 1199 aa24.71■■□□□ 1.55
PKD1-240ENST00000570253 NFRKBQ6P4R8 1299 aa24.71■■□□□ 1.55
PKD1-240ENST00000570253 DEFB128Q7Z7B8 93 aa24.71■■□□□ 1.55
PKD1-240ENST00000570253 RILPL2Q969X0 211 aa24.71■■□□□ 1.55
PKD1-240ENST00000570253 ASB2Q96Q27 587 aa24.71■■□□□ 1.55
PKD1-240ENST00000570253 TXNP10599 105 aaKnown RBP24.7■■□□□ 1.54
PKD1-240ENST00000570253 RABGGTBP53611 331 aa24.7■■□□□ 1.54
PKD1-240ENST00000570253 NMIQ13287 307 aaPredicted RBP24.7■■□□□ 1.54
PKD1-240ENST00000570253 BFSP2Q13515 415 aa24.7■■□□□ 1.54
PKD1-240ENST00000570253 TMEM67Q5HYA8 995 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms