RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 MCM4P33991 863 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 SLC1A4P43007 532 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 KLRC3Q07444 240 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 PFKFB3Q16875 520 aaPredicted RBP11.53□□□□□ -0.56
GDE1-205ENST00000569899 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 MCTP1Q6DN14 999 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 HOMER1Q86YM7 354 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 SCYL3Q8IZE3 742 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 SPICE1Q8N0Z3 855 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 ZKSCAN4Q969J2 545 aaPredicted RBP11.53□□□□□ -0.56
GDE1-205ENST00000569899 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
GDE1-205ENST00000569899 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 CDCA5Q96FF9 252 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 LZTS2Q9BRK4 669 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 PRM3Q9NNZ6 103 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 KCNJ14Q9UNX9 436 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 TMX2Q9Y320 296 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 LOC285556D6RIA3 1793 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 COL11A1P12107 1806 aaPredicted RBP11.53□□□□□ -0.56
GDE1-205ENST00000569899 SLC16A2P36021 539 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 KIF23Q02241 960 aaPredicted RBP11.53□□□□□ -0.56
GDE1-205ENST00000569899 TRIM29Q14134 588 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 GPATCH4Q5T3I0 446 aaKnown RBP11.53□□□□□ -0.56
GDE1-205ENST00000569899 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
GDE1-205ENST00000569899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.53□□□□□ -0.56
GDE1-205ENST00000569899 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.56
GDE1-205ENST00000569899 FEZ1Q99689 392 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 RIOX1Q9H6W3 641 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 RBBP6Q7Z6E9 1792 aaKnown RBP11.52□□□□□ -0.57
GDE1-205ENST00000569899 TRPM7Q96QT4 1865 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 MMP1P03956 469 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 ABL2P42684 1182 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 DNM1Q05193 864 aaKnown RBP11.52□□□□□ -0.57
GDE1-205ENST00000569899 DGKZQ13574 1117 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 WWC2Q6AWC2 1192 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 PIGSQ96S52 555 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 ZMYND15Q9H091 742 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 SH2D4AQ9H788 454 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 RRAGCQ9HB90 399 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 VAT1LQ9HCJ6 419 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 GINM1Q9NU53 330 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 RLFQ13129 1914 aa11.52□□□□□ -0.57
GDE1-205ENST00000569899 USP2O75604 605 aaPredicted RBP11.51□□□□□ -0.57
GDE1-205ENST00000569899 BMP3P12645 472 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 PTPRAP18433 802 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 NOL9Q5SY16 702 aaKnown RBP11.51□□□□□ -0.57
GDE1-205ENST00000569899 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 MAP1SQ66K74 1059 aaPredicted RBP11.51□□□□□ -0.57
GDE1-205ENST00000569899 HEATR3Q7Z4Q2 680 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 ADGRF4Q8IZF3 695 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 RGS22Q8NE09 1264 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 ZNF526Q8TF50 670 aaPredicted RBP11.51□□□□□ -0.57
GDE1-205ENST00000569899 RRP36Q96EU6 259 aaKnown RBP11.51□□□□□ -0.57
GDE1-205ENST00000569899 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 ZSCAN16Q9H4T2 348 aaPredicted RBP11.51□□□□□ -0.57
GDE1-205ENST00000569899 NMRK2Q9NPI5 230 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 PICK1Q9NRD5 415 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 ATP6V1DQ9Y5K8 247 aa11.51□□□□□ -0.57
GDE1-205ENST00000569899 A6NJR5 290 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 FIBPO43427 364 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 XBP1P17861 261 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
GDE1-205ENST00000569899 VGLL4Q14135 290 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 NPY5RQ15761 445 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 LIAT1Q6ZQX7 453 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.5□□□□□ -0.57
GDE1-205ENST00000569899 MOB2Q70IA6 237 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 DIS3L2Q8IYB7 885 aaKnown RBP11.5□□□□□ -0.57
GDE1-205ENST00000569899 ARMC2Q8NEN0 867 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
GDE1-205ENST00000569899 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
GDE1-205ENST00000569899 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 STXBP3O00186 592 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 TRAF5O00463 557 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
GDE1-205ENST00000569899 NF2P35240 595 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.57
GDE1-205ENST00000569899 IKQ13123 557 aaPredicted RBP11.49□□□□□ -0.57
GDE1-205ENST00000569899 IRF5Q13568 498 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 GNL2Q13823 731 aaKnown RBP11.49□□□□□ -0.57
GDE1-205ENST00000569899 BAP1Q92560 729 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 FTOQ9C0B1 505 aaKnown RBP eCLIP11.49□□□□□ -0.57
GDE1-205ENST00000569899 KIAA1683Q9H0B3 1180 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 BTBD18B2RXH4 712 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 ADAMTS3O15072 1205 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 PPP1R12BO60237 982 aaPredicted RBP11.49□□□□□ -0.57
GDE1-205ENST00000569899 PPP1R11O60927 126 aaPredicted RBP11.49□□□□□ -0.57
GDE1-205ENST00000569899 KRT2P35908 639 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 RPIAP49247 311 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 KRT85P78386 507 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 TRIM32Q13049 653 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms