RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PCDHB15Q9Y5E8 787 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 TNFRSF10AO00220 468 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 MYL3P08590 195 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 NKX3-2P78367 333 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 BAATQ14032 418 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-220ENST00000569827 RRP12Q5JTH9 1297 aaKnown RBP14.29□□□□□ -0.12
CAPN3-220ENST00000569827 RCSD1Q6JBY9 416 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 SLC30A10Q6XR72 485 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 DEFB128Q7Z7B8 93 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 NECAB3Q96P71 396 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-220ENST00000569827 GPCPD1Q9NPB8 672 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 THEGQ9P2T0 379 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 SYNPO2Q9UMS6 1093 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 DOCK5Q9H7D0 1870 aa14.29□□□□□ -0.12
CAPN3-220ENST00000569827 RFXAPO00287 272 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 FDX1P10109 184 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 TTLL4Q14679 1199 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 RAB30Q15771 203 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 TKFCQ3LXA3 575 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 ADAMTS19Q8TE59 1207 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 COPS5Q92905 334 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 SLC28A3Q9HAS3 691 aa14.28□□□□□ -0.12
CAPN3-220ENST00000569827 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 ERC2O15083 957 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 MX1P20591 662 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 COL9A1P20849 921 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 CALML3P27482 149 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.13
CAPN3-220ENST00000569827 CHMP4BP1P59074 171 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 FAM47CQ5HY64 1035 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 PPP2R2DQ66LE6 453 aa14.27□□□□□ -0.13
CAPN3-220ENST00000569827 ALDH8A1Q9H2A2 487 aaPredicted RBP14.27□□□□□ -0.13
CAPN3-220ENST00000569827 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.13
CAPN3-220ENST00000569827 TNKSO95271 1327 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 ZEB2O60315 1214 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 CABYRO75952 493 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 ICAM1P05362 532 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 HAND2P61296 217 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 TFF2Q03403 129 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 LRRFIP1Q32MZ4 808 aaKnown RBP14.26□□□□□ -0.13
CAPN3-220ENST00000569827 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 SYDE2Q5VT97 1194 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 KRT40Q6A162 431 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 IQSEC1Q6DN90 963 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 ASB2Q96Q27 587 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 WDR11Q9BZH6 1224 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
CAPN3-220ENST00000569827 RANBP17Q9H2T7 1088 aaKnown RBP14.26□□□□□ -0.13
CAPN3-220ENST00000569827 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 VTA1Q9NP79 307 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 SLC4A7Q9Y6M7 1214 aa14.26□□□□□ -0.13
CAPN3-220ENST00000569827 SALL3Q9BXA9 1300 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 A0A0D9SFI3 127 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 EPOPA6NHQ4 379 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 PLA2G6O60733 806 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 ARHGEF15O94989 841 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 DUSP28Q4G0W2 176 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 SPRED2Q7Z698 418 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 DCAF4Q8WV16 495 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 TMEM47Q9BQJ4 181 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 SIP14410 1827 aa14.25□□□□□ -0.13
CAPN3-220ENST00000569827 CA3P07451 260 aa14.24□□□□□ -0.13
CAPN3-220ENST00000569827 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
CAPN3-220ENST00000569827 KCNQ1P51787 676 aa14.24□□□□□ -0.13
CAPN3-220ENST00000569827 PURAQ00577 322 aaKnown RBP14.24□□□□□ -0.13
CAPN3-220ENST00000569827 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
CAPN3-220ENST00000569827 ZNF589Q86UQ0 364 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-220ENST00000569827 MORC4Q8TE76 937 aa14.24□□□□□ -0.13
CAPN3-220ENST00000569827 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
CAPN3-220ENST00000569827 CLEC4DQ8WXI8 215 aa14.24□□□□□ -0.13
CAPN3-220ENST00000569827 UHRF1Q96T88 793 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-220ENST00000569827 MICAL3Q7RTP6 2002 aa14.24□□□□□ -0.13
CAPN3-220ENST00000569827 ORC4O43929 436 aa14.23□□□□□ -0.13
CAPN3-220ENST00000569827 ARIH2O95376 493 aa14.23□□□□□ -0.13
CAPN3-220ENST00000569827 MRPS5P82675 430 aaKnown RBP14.23□□□□□ -0.13
CAPN3-220ENST00000569827 SKIV2LQ15477 1246 aaKnown RBP14.23□□□□□ -0.13
CAPN3-220ENST00000569827 USH1GQ495M9 461 aa14.23□□□□□ -0.13
CAPN3-220ENST00000569827 TMCO2Q7Z6W1 182 aaPredicted RBP14.23□□□□□ -0.13
CAPN3-220ENST00000569827 ZKSCAN3Q9BRR0 538 aa14.23□□□□□ -0.13
CAPN3-220ENST00000569827 ADD3Q9UEY8 706 aaKnown RBP14.23□□□□□ -0.13
CAPN3-220ENST00000569827 ANAPC4Q9UJX5 808 aa14.23□□□□□ -0.13
CAPN3-220ENST00000569827 Q9Y3F1 56 aa14.23□□□□□ -0.13
CAPN3-220ENST00000569827 FGAP02671 866 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 GOLGA8HP0CJ92 632 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 PDHBP11177 359 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 TOP1P11387 765 aaKnown RBP14.22□□□□□ -0.13
CAPN3-220ENST00000569827 NOVP48745 357 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 RPS6P62753 249 aaKnown RBP14.22□□□□□ -0.13
CAPN3-220ENST00000569827 PDE4DQ08499 809 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 BTNL9Q6UXG8 535 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 RNF207Q6ZRF8 634 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 TBC1D10CQ8IV04 446 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 RPUSD2Q8IZ73 545 aaKnown RBP14.22□□□□□ -0.13
CAPN3-220ENST00000569827 MTG1Q9BT17 334 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms