RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	NPY5R	Q15761	445 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	METTL16	Q86W50	562 aa	Known RBP	13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	STAG2	Q8N3U4	1231 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	MAD2L2	Q9UI95	211 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	STX8	Q9UNK0	236 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	NFE2L3	Q9Y4A8	694 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	C21orf2	O43822	256 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	NOV	P48745	357 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	MAP9	Q49MG5	647 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	SHC4	Q6S5L8	630 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	PANX2	Q96RD6	677 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	PCDHA5	Q9Y5H7	936 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	PCDHAC2	Q9Y5I4	1007 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	COL4A5	P29400	1685 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	SCG2	P13521	617 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	NFIA	Q12857	509 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	PPP2R5A	Q15172	486 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	PFKFB3	Q16875	520 aa	Predicted RBP	13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	SLC35G1	Q2M3R5	365 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	RASGRP2	Q7LDG7	609 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	SUPT20H	Q8NEM7	779 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	SLC16A10	Q8TF71	515 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	CEP95	Q96GE4	821 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	MRI	Q9BWK5	157 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	VIPAS39	Q9H9C1	493 aa		13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.41	□□□□□ -0.26
SPG7-222	ENST00000569820	YDJC	A8MPS7	323 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	ERLIN2	O94905	339 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	VEGFA	P15692	232 aa	Predicted RBP	13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	ZNF18	P17022	549 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	KCNA3	P22001	575 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	KRT2	P35908	639 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	AARS	P49588	968 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	HDLBP	Q00341	1268 aa	Known RBP	13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	WHAMMP3	Q1A5X7	153 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	RILPL1	Q5EBL4	403 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	RAD9B	Q6WBX8	426 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	NAA15	Q9BXJ9	866 aa	Known RBP	13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	BRCA1	P38398	1863 aa	Known RBP	13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	MYO3B	Q8WXR4	1341 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	FAM205C	A6NFA0	338 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	BMP6	P22004	513 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	EARS2	Q5JPH6	523 aa	Known RBP	13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	WDR93	Q6P2C0	686 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	TTLL6	Q8N841	843 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	TNFRSF25	Q93038	417 aa		13.4	□□□□□ -0.26
SPG7-222	ENST00000569820	MYH4	Q9Y623	1939 aa		13.4	□□□□□ -0.27
SPG7-222	ENST00000569820		A0A0U1RQJ8	604 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	FAM237A	A0A1B0GTK4	181 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	PALM3	A6NDB9	673 aa	Predicted RBP	13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	PPIP5K2	O43314	1243 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	USP8	P40818	1118 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	BIRC2	Q13490	618 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	SKIDA1	Q1XH10	827 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	LONRF3	Q496Y0	759 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	RESP18	Q5W5W9	173 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	SLC35F6	Q8N357	371 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	ATRIP	Q8WXE1	791 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	NAPG	Q99747	312 aa	Predicted RBP	13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	SERPINB13	Q9UIV8	391 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	PCDHB6	Q9Y5E3	794 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	IGKV6D-41	A0A0C4DH26	115 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	CYTH3	O43739	400 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	PRPF6	O94906	941 aa	Known RBP	13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	SYF2	O95926	243 aa	Known RBP	13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	TFRC	P02786	760 aa	Known RBP	13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	DPEP1	P16444	411 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	GNAQ	P50148	359 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	PPFIBP1	Q86W92	1011 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	ZFPM1	Q8IX07	1006 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	CABP5	Q9NP86	173 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	SWAP70	Q9UH65	585 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	DACH1	Q9UI36	760 aa		13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	HOOK1	Q9UJC3	728 aa	Known RBP	13.39	□□□□□ -0.27
SPG7-222	ENST00000569820	AKR1B1	P15121	316 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	SHMT1	P34896	483 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	FMR1	Q06787	632 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	ENOX1	Q8TC92	643 aa	Known RBP	13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	SERPINA10	Q9UK55	444 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	KCNH3	Q9ULD8	1083 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	MTMR7	Q9Y216	660 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	LIG3	P49916	1009 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	CACNB3	P54284	484 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	NR1I3	Q14994	352 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	TRMT44	Q8IYL2	757 aa	Known RBP	13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	MLKL	Q8NB16	471 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	NOA1	Q8NC60	698 aa	Known RBP	13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	CCDC148	Q8NFR7	591 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	CLIC6	Q96NY7	704 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	PSMD1	Q99460	953 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	IDI2	Q9BXS1	227 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	EHD4	Q9H223	541 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	MTMR4	Q9NYA4	1195 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	FAM198A	Q9UFP1	575 aa		13.38	□□□□□ -0.27
SPG7-222	ENST00000569820	ADAMTS3	O15072	1205 aa		13.37	□□□□□ -0.27
SPG7-222	ENST00000569820	MNAT1	P51948	309 aa		13.37	□□□□□ -0.27
SPG7-222	ENST00000569820	RTKN2	Q8IZC4	609 aa		13.37	□□□□□ -0.27
SPG7-222	ENST00000569820	IGSF22	Q8N9C0	903 aa		13.37	□□□□□ -0.27

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