RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 KIAA1217Q5T5P2 1943 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 CHD9Q3L8U1 2897 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 RBM47A0AV96 593 aaKnown RBP9.14□□□□□ -0.95
CDH3-209ENST00000569080 PTPDC1A2A3K4 754 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 PALM3A6NDB9 673 aaPredicted RBP9.14□□□□□ -0.95
CDH3-209ENST00000569080 KIAA0355O15063 1070 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 ASGR1P07306 291 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 PARP1P09874 1014 aaKnown RBP9.14□□□□□ -0.95
CDH3-209ENST00000569080 C6orf222P0C671 652 aaPredicted RBP9.14□□□□□ -0.95
CDH3-209ENST00000569080 GHRHRQ02643 423 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 TNFAIP2Q03169 654 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 TLE2Q04725 743 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 TROAPQ12815 778 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 GRM4Q14833 912 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 USH1GQ495M9 461 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 RNF207Q6ZRF8 634 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 EEPD1Q7L9B9 569 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 RGS22Q8NE09 1264 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 UBE2OQ9C0C9 1292 aaKnown RBP9.14□□□□□ -0.95
CDH3-209ENST00000569080 TBX21Q9UL17 535 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 GRIN2DO15399 1336 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 ELP1O95163 1332 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 CYTH3O43739 400 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 PQBP1O60828 265 aaKnown RBP9.13□□□□□ -0.95
CDH3-209ENST00000569080 CLTBP09497 229 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 CALML3P27482 149 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 CDK7P50613 346 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 BEX3Q00994 111 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 FAAP100Q0VG06 881 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 DUSP28Q4G0W2 176 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 CHST3Q7LGC8 479 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 RALYLQ86SE5 291 aaKnown RBP9.13□□□□□ -0.95
CDH3-209ENST00000569080 DNERQ8NFT8 737 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 NCOA7Q8NI08 942 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 SYTL5Q8TDW5 730 aaPredicted RBP9.13□□□□□ -0.95
CDH3-209ENST00000569080 IGDCC4Q8TDY8 1250 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 TBC1D5Q92609 795 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 TOX2Q96NM4 488 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 MAF1Q9H063 256 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 LY9Q9HBG7 655 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 PRDM5Q9NQX1 630 aaPredicted RBP9.13□□□□□ -0.95
CDH3-209ENST00000569080 GPHNQ9NQX3 736 aaPredicted RBP9.13□□□□□ -0.95
CDH3-209ENST00000569080 STARD7Q9NQZ5 370 aa9.13□□□□□ -0.95
CDH3-209ENST00000569080 ADD3Q9UEY8 706 aaKnown RBP9.13□□□□□ -0.95
CDH3-209ENST00000569080 BAZ2BQ9UIF8 2168 aaKnown RBP9.12□□□□□ -0.95
CDH3-209ENST00000569080 KLRF2D3W0D1 207 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 IFIT3O14879 490 aaKnown RBP9.12□□□□□ -0.95
CDH3-209ENST00000569080 SLC27A2O14975 620 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 ZBTB5O15062 677 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 ARIH2O95376 493 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 HSD17B4P51659 736 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 EPHB4P54760 987 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 TRDNQ13061 729 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 NECTIN1Q15223 517 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 FSCN1Q16658 493 aaKnown RBP9.12□□□□□ -0.95
CDH3-209ENST00000569080 GNASQ5JWF2 1037 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 IQSEC1Q6DN90 963 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 CXCL17Q6UXB2 119 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 FBXO11Q86XK2 927 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 FAM126BQ8IXS8 530 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 SLC43A3Q8NBI5 491 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 PCSK9Q8NBP7 692 aaKnown RBP9.12□□□□□ -0.95
CDH3-209ENST00000569080 NUP133Q8WUM0 1156 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 BADQ92934 168 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 GLT1D1Q96MS3 346 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 RIOX1Q9H6W3 641 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 SPC25Q9HBM1 224 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 CHD7Q9P2D1 2997 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 Q9Y3F1 56 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 UNC80Q8N2C7 3258 aa9.12□□□□□ -0.95
CDH3-209ENST00000569080 TANC1Q9C0D5 1861 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 A0A0U1RQG5 324 aaPredicted RBP9.11□□□□□ -0.95
CDH3-209ENST00000569080 ARVCFO00192 962 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 SH2B2O14492 632 aaPredicted RBP9.11□□□□□ -0.95
CDH3-209ENST00000569080 CD4P01730 458 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 WTAPQ15007 396 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 C9orf50Q5SZB4 431 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 CREB3L3Q68CJ9 461 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 GPR153Q6NV75 609 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 TAAR1Q96RJ0 339 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 LBHD1Q9BQE6 289 aaPredicted RBP9.11□□□□□ -0.95
CDH3-209ENST00000569080 MTA3Q9BTC8 594 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 AMNQ9BXJ7 453 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 WDR11Q9BZH6 1224 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 PRKAG2Q9UGJ0 569 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 PRUNE2Q8WUY3 3088 aa9.11□□□□□ -0.95
CDH3-209ENST00000569080 FRMPD4Q14CM0 1322 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 MROH7Q68CQ1 1323 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 A0A0C4DFX4 3053 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 DYNC1LI2O43237 492 aaPredicted RBP9.1□□□□□ -0.95
CDH3-209ENST00000569080 PRC1O43663 620 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 DHX16O60231 1041 aaKnown RBP9.1□□□□□ -0.95
CDH3-209ENST00000569080 DDAH1O94760 285 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 PURAQ00577 322 aaKnown RBP9.1□□□□□ -0.95
CDH3-209ENST00000569080 PDE4DQ08499 809 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 SART3Q15020 963 aaKnown RBP9.1□□□□□ -0.95
CDH3-209ENST00000569080 PPP2R5BQ15173 497 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 SHHQ15465 462 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 TMEM67Q5HYA8 995 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms