RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 GPR37L1O60883 481 aa14.82□□□□□ -0.04
SNX29-207ENST00000568949 CPT1AP50416 773 aa14.82□□□□□ -0.04
SNX29-207ENST00000568949 PURAQ00577 322 aaKnown RBP14.82□□□□□ -0.04
SNX29-207ENST00000568949 TAP1Q03518 808 aa14.82□□□□□ -0.04
SNX29-207ENST00000568949 IKQ13123 557 aaPredicted RBP14.82□□□□□ -0.04
SNX29-207ENST00000568949 PWP2Q15269 919 aaKnown RBP14.82□□□□□ -0.04
SNX29-207ENST00000568949 PPP4R3BQ5MIZ7 849 aa14.82□□□□□ -0.04
SNX29-207ENST00000568949 TMEM63BQ5T3F8 832 aa14.82□□□□□ -0.04
SNX29-207ENST00000568949 CERS4Q9HA82 394 aa14.82□□□□□ -0.04
SNX29-207ENST00000568949 DDX49Q9Y6V7 483 aaKnown RBP14.82□□□□□ -0.04
SNX29-207ENST00000568949 LCTP09848 1927 aa14.82□□□□□ -0.04
SNX29-207ENST00000568949 MUC6Q6W4X9 2439 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 PATL2C9JE40 543 aaKnown RBP14.81□□□□□ -0.04
SNX29-207ENST00000568949 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 RNF113AO15541 343 aaKnown RBP14.81□□□□□ -0.04
SNX29-207ENST00000568949 ZFYP08048 801 aaPredicted RBP14.81□□□□□ -0.04
SNX29-207ENST00000568949 TFAP4Q01664 338 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 PDE4BQ07343 736 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 MUM1L1Q5H9M0 696 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 KRT40Q6A162 431 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 RCSD1Q6JBY9 416 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 HERC6Q8IVU3 1022 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 RETREG2Q8NC44 543 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 ARNTL2Q8WYA1 636 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 MTG1Q9BT17 334 aaPredicted RBP14.81□□□□□ -0.04
SNX29-207ENST00000568949 LRRCC1Q9C099 1032 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 GPHNQ9NQX3 736 aaPredicted RBP14.81□□□□□ -0.04
SNX29-207ENST00000568949 ECHDC1Q9NTX5 307 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 ADD3Q9UEY8 706 aaKnown RBP14.81□□□□□ -0.04
SNX29-207ENST00000568949 TET1Q8NFU7 2136 aa14.81□□□□□ -0.04
SNX29-207ENST00000568949 RBM47A0AV96 593 aaKnown RBP14.8□□□□□ -0.04
SNX29-207ENST00000568949 BAIAP3O94812 1187 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 APPP05067 770 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 SLC3A2P08195 630 aaKnown RBP14.8□□□□□ -0.04
SNX29-207ENST00000568949 IQCF3P0C7M6 154 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 MCCP23508 829 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 NFRKBQ6P4R8 1299 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 NSMFQ6X4W1 530 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 IFNL3Q8IZI9 196 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 WDR11Q9BZH6 1224 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 CHMP4BQ9H444 224 aaKnown RBP14.8□□□□□ -0.04
SNX29-207ENST00000568949 LMCD1Q9NZU5 365 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 CCPG1Q9ULG6 757 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 PRR12Q9ULL5 1215 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 TANC1Q9C0D5 1861 aa14.8□□□□□ -0.04
SNX29-207ENST00000568949 KPNA6O60684 536 aa14.79□□□□□ -0.04
SNX29-207ENST00000568949 ARHGEF15O94989 841 aa14.79□□□□□ -0.04
SNX29-207ENST00000568949 MYL3P08590 195 aa14.79□□□□□ -0.04
SNX29-207ENST00000568949 PTPN11Q06124 597 aaPredicted RBP14.79□□□□□ -0.04
SNX29-207ENST00000568949 GRB10Q13322 594 aa14.79□□□□□ -0.04
SNX29-207ENST00000568949 NBPF20Q3BBV1 942 aa14.79□□□□□ -0.04
SNX29-207ENST00000568949 BRDTQ58F21 947 aaPredicted RBP14.79□□□□□ -0.04
SNX29-207ENST00000568949 NACAP1Q9BZK3 213 aa14.79□□□□□ -0.04
SNX29-207ENST00000568949 FTOQ9C0B1 505 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNX29-207ENST00000568949 REV3LO60673 3130 aa14.79□□□□□ -0.04
SNX29-207ENST00000568949 RAD50Q92878 1312 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 PI4K2BG5E9Z4 385 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 M0R2C6 588 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 NKRFO15226 690 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX29-207ENST00000568949 LPXNO60711 386 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 ICAM1P05362 532 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 ALDH5A1P51649 535 aaPredicted RBP14.78□□□□□ -0.04
SNX29-207ENST00000568949 SNAP25P60880 206 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 BFSP2Q13515 415 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 LRRFIP1Q32MZ4 808 aaKnown RBP14.78□□□□□ -0.04
SNX29-207ENST00000568949 FAM47CQ5HY64 1035 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 KCTD1Q719H9 257 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 OR6J1Q8NGC5 347 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 KHSRPQ92945 711 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX29-207ENST00000568949 PURBQ96QR8 312 aaKnown RBP14.78□□□□□ -0.04
SNX29-207ENST00000568949 C11orf16Q9NQ32 467 aa14.78□□□□□ -0.04
SNX29-207ENST00000568949 TRIP12Q14669 1992 aaPredicted RBP14.77□□□□□ -0.04
SNX29-207ENST00000568949 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNX29-207ENST00000568949 PPARAQ07869 468 aa14.77□□□□□ -0.05
SNX29-207ENST00000568949 BAATQ14032 418 aaPredicted RBP14.77□□□□□ -0.05
SNX29-207ENST00000568949 RANBP17Q9H2T7 1088 aaKnown RBP14.77□□□□□ -0.05
SNX29-207ENST00000568949 STX8Q9UNK0 236 aa14.77□□□□□ -0.05
SNX29-207ENST00000568949 A6NJR5 290 aa14.76□□□□□ -0.05
SNX29-207ENST00000568949 SMARCA5O60264 1052 aaPredicted RBP14.76□□□□□ -0.05
SNX29-207ENST00000568949 KCNJ6P48051 423 aa14.76□□□□□ -0.05
SNX29-207ENST00000568949 CHMP4CQ96CF2 233 aa14.76□□□□□ -0.05
SNX29-207ENST00000568949 GPATCH3Q96I76 525 aa14.76□□□□□ -0.05
SNX29-207ENST00000568949 NAPBQ9H115 298 aa14.76□□□□□ -0.05
SNX29-207ENST00000568949 XIRP2A4UGR9 3374 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 COL4A4P53420 1690 aaPredicted RBP14.75□□□□□ -0.05
SNX29-207ENST00000568949 PTPRSQ13332 1948 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 NOVP48745 357 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 PPP2R5BQ15173 497 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 BTNL9Q6UXG8 535 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 CCDC155Q8N6L0 562 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 CAGE1Q8TC20 777 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 AFAP1L1Q8TED9 768 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 DCAF4Q8WV16 495 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 MPHOSPH6Q99547 160 aaKnown RBP14.75□□□□□ -0.05
SNX29-207ENST00000568949 IL17RBQ9NRM6 502 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 PNMA2Q9UL42 364 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 NOD1Q9Y239 953 aa14.75□□□□□ -0.05
SNX29-207ENST00000568949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNX29-207ENST00000568949 FAM86C2PA6NEL3 165 aa14.74□□□□□ -0.05
SNX29-207ENST00000568949 TSPY2A6NKD2 308 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms