RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 CYB5R4Q7L1T6 521 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 PNMA1Q8ND90 353 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 PAWRQ96IZ0 340 aaKnown RBP13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 TINF2Q9BSI4 451 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 FBXO40Q9UH90 709 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 FRMPD2Q68DX3 1309 aaPredicted RBP13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 PFKFB2O60825 505 aa13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 HMGN5P82970 282 aaKnown RBP13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 SEC23AQ15436 765 aa13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 TKFCQ3LXA3 575 aa13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 PRAMEF19Q5SWL8 479 aa13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 PRPF38BQ5VTL8 546 aaKnown RBP13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
SNAPC5-208ENST00000568875 TNKSO95271 1327 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 E7EWF7 191 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 MSCO60682 206 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 TRDNQ13061 729 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 GPATCH4Q5T3I0 446 aaKnown RBP13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 CCDC174Q6PII3 467 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 Q6ZUG5 572 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 STOX1Q6ZVD7 989 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 NECAB2Q7Z6G3 386 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 ANKRD35Q8N283 1001 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 DIS3LQ8TF46 1054 aaKnown RBP13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 KAT14Q9H8E8 782 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 CFAP45Q9UL16 551 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 PLXNA1Q9UIW2 1896 aa13.31□□□□□ -0.28
SNAPC5-208ENST00000568875 SEPT4O43236 478 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 RRP9O43818 475 aaKnown RBP13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 CAVIN2O95810 425 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 ICAM1P05362 532 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 CNGA1P29973 690 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 EXOSC10Q01780 885 aaKnown RBP13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 MAMDC4Q6UXC1 1216 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 FGD4Q96M96 766 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 UBAC1Q9BSL1 405 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 ACAD9Q9H845 621 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 HOMER2Q9NSB8 354 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 RNF146Q9NTX7 359 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 GOLGA6L4A6NEF3 574 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 ADCY5O95622 1261 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 ALAS1P13196 640 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 RGS22Q8NE09 1264 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 LEO1Q8WVC0 666 aaPredicted RBP13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 SPATA32Q96LK8 384 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 HTATIP2Q9BUP3 242 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 NUP62CLQ9H1M0 184 aa13.3□□□□□ -0.28
SNAPC5-208ENST00000568875 SNAI1O95863 264 aaPredicted RBP13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 EVCP57679 992 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 RESTQ13127 1097 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 COL9A3Q14050 684 aaPredicted RBP13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 MUM1L1Q5H9M0 696 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 IFIT1BQ5T764 474 aaKnown RBP13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 FAM133AQ8N9E0 248 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 DPF3Q92784 378 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 UBA5Q9GZZ9 404 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 A1CFQ9NQ94 594 aaKnown RBP13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 CCPG1Q9ULG6 757 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 SYNGAP1Q96PV0 1343 aa13.29□□□□□ -0.28
SNAPC5-208ENST00000568875 ZNF865P0CJ78 1059 aaPredicted RBP13.28□□□□□ -0.28
SNAPC5-208ENST00000568875 COL6A1P12109 1028 aa13.28□□□□□ -0.28
SNAPC5-208ENST00000568875 CNTN2Q02246 1040 aa13.28□□□□□ -0.28
SNAPC5-208ENST00000568875 FAM200AQ8TCP9 573 aa13.28□□□□□ -0.28
SNAPC5-208ENST00000568875 TCEANC2Q96MN5 208 aa13.28□□□□□ -0.28
SNAPC5-208ENST00000568875 CPVLQ9H3G5 476 aa13.28□□□□□ -0.28
SNAPC5-208ENST00000568875 H3BQV1 296 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 POTEB2H3BUK9 544 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 IFIT3O14879 490 aaKnown RBP13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 ANTXR2P58335 489 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 ASPRV1Q53RT3 343 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 RALYLQ86SE5 291 aaKnown RBP13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 MB21D2Q8IYB1 491 aaPredicted RBP13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 IGDCC4Q8TDY8 1250 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 CLSTN2Q9H4D0 955 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 C11orf49Q9H6J7 331 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 SENP2Q9HC62 589 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 CYP39A1Q9NYL5 469 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 PNMA2Q9UL42 364 aa13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.27□□□□□ -0.28
SNAPC5-208ENST00000568875 SOWAHBA6NEL2 793 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms