RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 DEFB128Q7Z7B8 93 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 PHOSPHO2Q8TCD6 241 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 GPATCH3Q96I76 525 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 NACAP1Q9BZK3 213 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 MYH7P12883 1935 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 PATL2C9JE40 543 aaKnown RBP14□□□□□ -0.17
GTF3C1-209ENST00000568569 M0R2C6 588 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 NSMFQ6X4W1 530 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 KCTD1Q719H9 257 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 CERS4Q9HA82 394 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 GPHNQ9NQX3 736 aaPredicted RBP14□□□□□ -0.17
GTF3C1-209ENST00000568569 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
GTF3C1-209ENST00000568569 CCPG1Q9ULG6 757 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 PRR12Q9ULL5 1215 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 STX8Q9UNK0 236 aa14□□□□□ -0.17
GTF3C1-209ENST00000568569 LOC102724159A0A0B4J2E5 919 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 EPOPA6NHQ4 379 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 KIF28PB7ZC32 967 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 SMARCA5O60264 1052 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 SNAP25P60880 206 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 TAP1Q03518 808 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 PWP2Q15269 919 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 LRRFIP1Q32MZ4 808 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 FAM47CQ5HY64 1035 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 RCSD1Q6JBY9 416 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 ARNTL2Q8WYA1 636 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 HLA-CQ95604 372 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 PURBQ96QR8 312 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 MTG1Q9BT17 334 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 LRFN3Q9BTN0 628 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 WDR11Q9BZH6 1224 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 NAPBQ9H115 298 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 EPHX3Q9H6B9 360 aa13.99□□□□□ -0.17
GTF3C1-209ENST00000568569 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 PIEZO1Q92508 2521 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 MYH4Q9Y623 1939 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 RAD50Q92878 1312 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 GBF1Q92538 1859 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 ICAM1P05362 532 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 MYL3P08590 195 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 ALDH5A1P51649 535 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 PPARAQ07869 468 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 TMEM31Q5JXX7 168 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 KRT40Q6A162 431 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 OR6J1Q8NGC5 347 aa13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 TCF20Q9UGU0 1960 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-209ENST00000568569 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 TLL1O43897 1013 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 BAIAP3O94812 1187 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 IQCF3P0C7M6 154 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 BFSP2Q13515 415 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 NFRKBQ6P4R8 1299 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 FTOQ9C0B1 505 aaKnown RBP eCLIP13.97□□□□□ -0.17
GTF3C1-209ENST00000568569 RBM47A0AV96 593 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 NKRFO15226 690 aaKnown RBP eCLIP13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 KPNA6O60684 536 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 ARHGEF15O94989 841 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 GRB10Q13322 594 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 PPP2R5BQ15173 497 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 CCDC96Q2M329 555 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 NOD1Q9Y239 953 aa13.96□□□□□ -0.17
GTF3C1-209ENST00000568569 PTPDC1A2A3K4 754 aa13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 NFIBO00712 420 aa13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 DCAF4Q8WV16 495 aa13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 SEC62Q99442 399 aaKnown RBP13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 MPHOSPH6Q99547 160 aaKnown RBP13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 IL17RBQ9NRM6 502 aa13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 MTMR7Q9Y216 660 aa13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
GTF3C1-209ENST00000568569 A6NJR5 290 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 NMT2O60551 498 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 LPXNO60711 386 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 GPR37L1O60883 481 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 KCNJ6P48051 423 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 PDE4DQ08499 809 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 PNMA2Q9UL42 364 aa13.94□□□□□ -0.18
GTF3C1-209ENST00000568569 EDNRBP24530 442 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 CALML3P27482 149 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 SLC16A2P36021 539 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 NOVP48745 357 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 BTNL9Q6UXG8 535 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 SLC30A10Q6XR72 485 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 CAGE1Q8TC20 777 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms