RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 USH1GQ495M9 461 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 ASPRV1Q53RT3 343 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 CXCL17Q6UXB2 119 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 ENAHQ8N8S7 591 aaPredicted RBP17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 MTMR10Q9NXD2 777 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 RAD50Q92878 1312 aa17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 TIMP1P01033 207 aa17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 PARP1P09874 1014 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 RPS6P62753 249 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 PDE4DQ08499 809 aa17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 TRDNQ13061 729 aa17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 IFIT1BQ5T764 474 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 FAM109BQ6ICB4 259 aaPredicted RBP17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 ADGRF4Q8IZF3 695 aa17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 WDR11Q9BZH6 1224 aa17.49■□□□□ 0.39
CCNDBP1-213ENST00000568507 CDC37Q16543 378 aaPredicted RBP17.48■□□□□ 0.39
CCNDBP1-213ENST00000568507 DUSP28Q4G0W2 176 aa17.48■□□□□ 0.39
CCNDBP1-213ENST00000568507 RGS22Q8NE09 1264 aa17.48■□□□□ 0.39
CCNDBP1-213ENST00000568507 DNERQ8NFT8 737 aa17.48■□□□□ 0.39
CCNDBP1-213ENST00000568507 RNPC3Q96LT9 517 aaKnown RBP17.48■□□□□ 0.39
CCNDBP1-213ENST00000568507 IL25Q9H293 177 aa17.48■□□□□ 0.39
CCNDBP1-213ENST00000568507 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
CCNDBP1-213ENST00000568507 ABCB11O95342 1321 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 CHMLP26374 656 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 TMEM63BQ5T3F8 832 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 ZNF697Q5TEC3 545 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 MFSD5Q6N075 450 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 SLC17A8Q8NDX2 589 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 SEZ6LQ9BYH1 1024 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 TBX21Q9UL17 535 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 STXBP5LQ9Y2K9 1186 aa17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
CCNDBP1-213ENST00000568507 PTGS1P23219 599 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 EPHB4P54760 987 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 PPIGQ13427 754 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 ITGA7Q13683 1181 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 MCF2L2Q86YR7 1114 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 FAM126BQ8IXS8 530 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 TMEM199Q8N511 208 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 FAM161BQ96MY7 647 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 MAF1Q9H063 256 aa17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
CCNDBP1-213ENST00000568507 RBM47A0AV96 593 aaKnown RBP17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 CPT1AP50416 773 aa17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 SMAD3P84022 425 aaKnown RBP17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 BRDTQ58F21 947 aaPredicted RBP17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 FBXO11Q86XK2 927 aa17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 SLC43A3Q8NBI5 491 aa17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 OR6J1Q8NGC5 347 aa17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 MRPL11Q9Y3B7 192 aaKnown RBP17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 LTBP2Q14767 1821 aa17.45■□□□□ 0.38
CCNDBP1-213ENST00000568507 ERICH2A1L162 156 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 NKRFO15226 690 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 CD4P01730 458 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 PTH1RQ03431 593 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 QRICH1Q2TAL8 776 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 CYB5R4Q7L1T6 521 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 RALYLQ86SE5 291 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 SCFD2Q8WU76 684 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 PPP1R12CQ9BZL4 782 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 JMJD4Q9H9V9 463 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 MCM3APO60318 1980 aa17.44■□□□□ 0.38
CCNDBP1-213ENST00000568507 IFIT3O14879 490 aaKnown RBP17.43■□□□□ 0.38
CCNDBP1-213ENST00000568507 MYL3P08590 195 aa17.43■□□□□ 0.38
CCNDBP1-213ENST00000568507 EDNRBP24530 442 aa17.43■□□□□ 0.38
CCNDBP1-213ENST00000568507 PSMC6P62333 389 aa17.43■□□□□ 0.38
CCNDBP1-213ENST00000568507 TBC1D5Q92609 795 aa17.43■□□□□ 0.38
CCNDBP1-213ENST00000568507 KLRF2D3W0D1 207 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 CYP21A2P08686 494 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 TXNP10599 105 aaKnown RBP17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 CSF2RAP15509 400 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 TTLL4Q14679 1199 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 SART3Q15020 963 aaKnown RBP17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 SEC23AQ15436 765 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 NCOA7Q8NI08 942 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 SYTL5Q8TDW5 730 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 NSUN6Q8TEA1 469 aaKnown RBP17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 TAAR1Q96RJ0 339 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 AMNQ9BXJ7 453 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 HIPK3Q9H422 1215 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 GRIN2DO15399 1336 aa17.42■□□□□ 0.38
CCNDBP1-213ENST00000568507 SGSM2O43147 1006 aa17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 CYP2C18P33260 490 aa17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 RMDN3Q96TC7 470 aa17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■■■□ 20.1
CCNDBP1-213ENST00000568507 MTG1Q9BT17 334 aaPredicted RBP17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 TRPV6Q9H1D0 765 aa17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 SEMA6BQ9H3T3 888 aa17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 MAD2L2Q9UI95 211 aa17.41■□□□□ 0.38
CCNDBP1-213ENST00000568507 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.4■□□□□ 0.38
CCNDBP1-213ENST00000568507 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.4■□□□□ 0.38
CCNDBP1-213ENST00000568507 E7EWF7 191 aa17.4■□□□□ 0.38
CCNDBP1-213ENST00000568507 KPNA6O60684 536 aa17.4■□□□□ 0.38
CCNDBP1-213ENST00000568507 CFBP00751 764 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms