RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 KRT83P78385 493 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 UBE4AQ14139 1066 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 TICAM2Q86XR7 235 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 GOLGA5Q8TBA6 731 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 HAUS4Q9H6D7 363 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 MYH2Q9UKX2 1941 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 LRRC53A6NM62 1247 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 EPS15P42566 896 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 CCDC70Q6NSX1 233 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 KLHL7Q8IXQ5 586 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 LINC00116Q8NCU8 138 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 SNX29Q8TEQ0 813 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 CALML4Q96GE6 196 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 EYA3Q99504 573 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 BAZ2AQ9UIF9 1905 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 NPHP3-ACAD11A0A0J9YXS1 232 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 FAM196BA6NMK8 535 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 USP17L5A8MUK1 530 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 MAGEA1P43355 309 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 USP14P54578 494 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 RAPGEF1Q13905 1077 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 TEX11Q8IYF3 940 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 MICALL1Q8N3F8 863 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 DUSP9Q99956 384 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 NUDT12Q9BQG2 462 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 PHRF1Q9P1Y6 1649 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 GOLGA6CA6NDK9 693 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 TRAF5O00463 557 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 GOLGA6DP0CG33 693 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 LIG3P49916 1009 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 DNM2P50570 870 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 NONOQ15233 471 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 TRIM9Q9C026 710 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 BSDC1Q9NW68 430 aaPredicted RBP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 GOLGA6AQ9NYA3 693 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 ARPP21Q9UBL0 812 aaPredicted RBP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 BCS1LQ9Y276 419 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 ALS2Q96Q42 1657 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 KIF11P52732 1056 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 TRIM14Q14142 442 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 TCERG1LQ5VWI1 586 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 TTI2Q6NXR4 508 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 TRAPPC11Q7Z392 1133 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 ZNF219Q9P2Y4 722 aaPredicted RBP9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
HDGFL3-206ENST00000568294 SLIT2O94813 1529 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 C6orf229H3BNL8 230 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 BACH1O14867 736 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 ZNF263O14978 683 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 KLRC4O43908 158 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 USO1O60763 962 aaKnown RBP9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 ATP2C2O75185 946 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 TACC1O75410 805 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 HPDP32754 393 aaPredicted RBP9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 SLC1A4P43007 532 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 BTDP43251 543 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 AMPD2Q01433 879 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 IKQ13123 557 aaPredicted RBP9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 HLTFQ14527 1009 aaKnown RBP eCLIP9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 CALCRLQ16602 461 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 SLC30A10Q6XR72 485 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 SRLQ86TD4 932 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 HPCAL4Q9UM19 191 aa9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.96□□□□□ -0.81
HDGFL3-206ENST00000568294 ADAMTS7Q9UKP4 1686 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 STXBP3O00186 592 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 SLC37A4O43826 429 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 NOP2P46087 812 aaKnown RBP9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 MAP9Q49MG5 647 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 LRRC31Q6UY01 552 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 ADAT2Q7Z6V5 191 aaKnown RBP9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 KIAA0895Q8NCT3 520 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 FAM71BQ8TC56 605 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 CEP95Q96GE4 821 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 ANAPC4Q9UJX5 808 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 CAPN11Q9UMQ6 739 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 MYH8P13535 1937 aa9.96□□□□□ -0.82
HDGFL3-206ENST00000568294 TMCO5BA8MYB1 307 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 POLR2FP61218 127 aaKnown RBP9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 GNGT1P63211 74 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 PDCLQ13371 301 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 SV2BQ7L1I2 683 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 NEK8Q86SG6 692 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 REXO1Q8N1G1 1221 aaKnown RBP9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 FAM76AQ8TAV0 307 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 MXD3Q9BW11 206 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 SEMA6BQ9H3T3 888 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 PCDHA13Q9Y5I0 950 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 ITIH6Q6UXX5 1313 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 COL4A1P02462 1669 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 NUP188Q5SRE5 1749 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 COL18A1P39060 1754 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 MYMKA6NI61 221 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 MEIS1O00470 390 aa9.95□□□□□ -0.82
HDGFL3-206ENST00000568294 SEMA3EO15041 775 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms