RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 IL22RA1Q8N6P7 574 aa8.31□□□□□ -1.08
CNOT1-212ENST00000567285 RTF1Q92541 710 aaKnown RBP8.31□□□□□ -1.08
CNOT1-212ENST00000567285 RBCK1Q9BYM8 510 aa8.31□□□□□ -1.08
CNOT1-212ENST00000567285 NIF3L1Q9GZT8 377 aa8.31□□□□□ -1.08
CNOT1-212ENST00000567285 DZANK1Q9NVP4 752 aa8.31□□□□□ -1.08
CNOT1-212ENST00000567285 PODXL2Q9NZ53 605 aa8.31□□□□□ -1.08
CNOT1-212ENST00000567285 COL1A1P02452 1464 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-212ENST00000567285 COL2A1P02458 1487 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-212ENST00000567285 DEAF1O75398 565 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-212ENST00000567285 SPATA31C1P0DKV0 1188 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 TFF2Q03403 129 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 TRIM28Q13263 835 aaKnown RBP8.3□□□□□ -1.08
CNOT1-212ENST00000567285 CD163Q86VB7 1156 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 NLRP10Q86W26 655 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 COA7Q96BR5 231 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 RNPC3Q96LT9 517 aaKnown RBP8.3□□□□□ -1.08
CNOT1-212ENST00000567285 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 ZKSCAN3Q9BRR0 538 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 PRDM12Q9H4Q4 367 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 PRDM5Q9NQX1 630 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-212ENST00000567285 MIS18AQ9NYP9 233 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 ALPK3Q96L96 1907 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 SCN9AQ15858 1988 aa8.3□□□□□ -1.08
CNOT1-212ENST00000567285 ZNF804BA4D1E1 1349 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 PFASO15067 1338 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 C1QTNF9BB2RNN3 333 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 F8W031 263 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-212ENST00000567285 KCNQ1P51787 676 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 HSP90AB3PQ58FF7 597 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 PRRT3Q5FWE3 981 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 GPAT2Q6NUI2 795 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 ANKRD23Q86SG2 305 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 ERO1BQ86YB8 467 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-212ENST00000567285 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 FBXL18Q96ME1 805 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 PARK7Q99497 189 aaKnown RBP8.29□□□□□ -1.08
CNOT1-212ENST00000567285 SENP6Q9GZR1 1112 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-212ENST00000567285 SH2B1Q9NRF2 756 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-212ENST00000567285 DCTN4Q9UJW0 460 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 OGDHLQ9ULD0 1010 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 SSC5DA1L4H1 1573 aa8.29□□□□□ -1.08
CNOT1-212ENST00000567285 CDH23Q9H251 3354 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 PRR33A8MZF0 331 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 U2SURPO15042 1029 aaKnown RBP8.28□□□□□ -1.08
CNOT1-212ENST00000567285 SMNDC1O75940 238 aaKnown RBP eCLIP8.28□□□□□ -1.084e-80■□□□□ 11.1
CNOT1-212ENST00000567285 KRT37O76014 449 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 HMGCRP04035 888 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 CYP2C8P10632 490 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 MAPK1P28482 360 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 CDC25BP30305 580 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 TXNDC11Q6PKC3 985 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-212ENST00000567285 TIFAQ96CG3 184 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 OSMRQ99650 979 aa8.28□□□□□ -1.08
CNOT1-212ENST00000567285 DDX60Q8IY21 1712 aaKnown RBP8.28□□□□□ -1.08
CNOT1-212ENST00000567285 NUP98P52948 1817 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.09
CNOT1-212ENST00000567285 SELPP16109 830 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 TNFAIP1Q13829 316 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 SF3B3Q15393 1217 aaKnown RBP8.27□□□□□ -1.09
CNOT1-212ENST00000567285 CCDC129Q6ZRS4 1044 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 MCM10Q7L590 875 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 BADQ92934 168 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 ZKSCAN4Q969J2 545 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-212ENST00000567285 FAM89AQ96GI7 184 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 ZBED3Q96IU2 234 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-212ENST00000567285 PRMT6Q96LA8 375 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-212ENST00000567285 THUMPD2Q9BTF0 503 aaKnown RBP8.27□□□□□ -1.09
CNOT1-212ENST00000567285 XDHP47989 1333 aa8.27□□□□□ -1.09
CNOT1-212ENST00000567285 TCF20Q9UGU0 1960 aaKnown RBP8.26□□□□□ -1.09
CNOT1-212ENST00000567285 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-212ENST00000567285 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-212ENST00000567285 PI4K2BG5E9Z4 385 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-212ENST00000567285 EIF1AYO14602 144 aaKnown RBP8.26□□□□□ -1.09
CNOT1-212ENST00000567285 COL6A1P12109 1028 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 EDN3P14138 238 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 EPHA1P21709 976 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 RAC1P63000 192 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 AIMP1Q12904 312 aaKnown RBP8.26□□□□□ -1.09
CNOT1-212ENST00000567285 PPIL2Q13356 520 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 CFAP100Q494V2 611 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.26□□□□□ -1.09
CNOT1-212ENST00000567285 COA1Q9GZY4 146 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 ATP11BQ9Y2G3 1177 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 PCDHAC2Q9Y5I4 1007 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 DNAH12Q6ZR08 3092 aa8.26□□□□□ -1.09
CNOT1-212ENST00000567285 METTL12A8MUP2 240 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 LINC01387J3KSC0 135 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 PROCP04070 461 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 CDC27P30260 824 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 DSC3Q14574 896 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 SETDB1Q15047 1291 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 TAF7Q15545 349 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-212ENST00000567285 FBXO11Q86XK2 927 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 GALNT12Q8IXK2 581 aa8.25□□□□□ -1.09
CNOT1-212ENST00000567285 SMCR8Q8TEV9 937 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms