RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 EDNRBP24530 442 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 BEX3Q00994 111 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 FSCN1Q16658 493 aaKnown RBP16.68■□□□□ 0.26
COMMD4-216ENST00000567023 DUSP28Q4G0W2 176 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
COMMD4-216ENST00000567023 EEPD1Q7L9B9 569 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 FAM126BQ8IXS8 530 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 DNERQ8NFT8 737 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 SEZ6LQ9BYH1 1024 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 TNKSO95271 1327 aa16.68■□□□□ 0.26
COMMD4-216ENST00000567023 DYNC1LI2O43237 492 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-216ENST00000567023 ZEB2O60315 1214 aa16.67■□□□□ 0.26
COMMD4-216ENST00000567023 CD4P01730 458 aa16.67■□□□□ 0.26
COMMD4-216ENST00000567023 SLC30A10Q6XR72 485 aa16.67■□□□□ 0.26
COMMD4-216ENST00000567023 KIAA1211Q6ZU35 1233 aa16.67■□□□□ 0.26
COMMD4-216ENST00000567023 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
COMMD4-216ENST00000567023 RUFY2Q8WXA3 655 aa16.67■□□□□ 0.26
COMMD4-216ENST00000567023 EYSQ5T1H1 3165 aa16.67■□□□□ 0.26
COMMD4-216ENST00000567023 CHMLP26374 656 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 CALML3P27482 149 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 EPHB4P54760 987 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 SMAD3P84022 425 aaKnown RBP16.66■□□□□ 0.26
COMMD4-216ENST00000567023 FPGSQ05932 587 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 SEC23AQ15436 765 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 TMEM63BQ5T3F8 832 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 MFSD5Q6N075 450 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 CXCL17Q6UXB2 119 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 MPHOSPH6Q99547 160 aaKnown RBP16.66■□□□□ 0.26
COMMD4-216ENST00000567023 UBAC1Q9BSL1 405 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 WDR11Q9BZH6 1224 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 CPVLQ9H3G5 476 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 UNC80Q8N2C7 3258 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 GRIN2DO15399 1336 aa16.66■□□□□ 0.26
COMMD4-216ENST00000567023 TLR3O15455 904 aaKnown RBP16.65■□□□□ 0.26
COMMD4-216ENST00000567023 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
COMMD4-216ENST00000567023 PTGS1P23219 599 aa16.65■□□□□ 0.26
COMMD4-216ENST00000567023 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-216ENST00000567023 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-216ENST00000567023 ABCB11O95342 1321 aa16.65■□□□□ 0.26
COMMD4-216ENST00000567023 B4DLN1 442 aa16.64■□□□□ 0.25
COMMD4-216ENST00000567023 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
COMMD4-216ENST00000567023 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
COMMD4-216ENST00000567023 USH1GQ495M9 461 aa16.64■□□□□ 0.25
COMMD4-216ENST00000567023 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
COMMD4-216ENST00000567023 JMJD4Q9H9V9 463 aa16.64■□□□□ 0.25
COMMD4-216ENST00000567023 NKRFO15226 690 aaKnown RBP eCLIP16.63■□□□□ 0.25
COMMD4-216ENST00000567023 SGSM2O43147 1006 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 CYP21A2P08686 494 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-216ENST00000567023 PTH1RQ03431 593 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 PDE4DQ08499 809 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 TRDNQ13061 729 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 QRICH1Q2TAL8 776 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 CYB5R4Q7L1T6 521 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 MCF2L2Q86YR7 1114 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 MTMR8Q96EF0 704 aa16.63■□□□□ 0.25
COMMD4-216ENST00000567023 RNPC3Q96LT9 517 aaKnown RBP16.63■□□□□ 0.25
COMMD4-216ENST00000567023 CPT1AP50416 773 aa16.62■□□□□ 0.25
COMMD4-216ENST00000567023 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
COMMD4-216ENST00000567023 C16orf59Q7L2K0 433 aa16.62■□□□□ 0.25
COMMD4-216ENST00000567023 TMEM199Q8N511 208 aa16.62■□□□□ 0.25
COMMD4-216ENST00000567023 TBC1D5Q92609 795 aa16.62■□□□□ 0.25
COMMD4-216ENST00000567023 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
COMMD4-216ENST00000567023 POLR3EQ9NVU0 708 aa16.62■□□□□ 0.25
COMMD4-216ENST00000567023 MRPL11Q9Y3B7 192 aaKnown RBP16.62■□□□□ 0.25
COMMD4-216ENST00000567023 PALM3A6NDB9 673 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-216ENST00000567023 A6NJR5 290 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
COMMD4-216ENST00000567023 GHRHRQ02643 423 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 PPIGQ13427 754 aaKnown RBP eCLIP16.61■□□□□ 0.251e-6■■■■■ 27.3
COMMD4-216ENST00000567023 FBXO11Q86XK2 927 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 STAG2Q8N3U4 1231 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 SLC17A8Q8NDX2 589 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 SYTL5Q8TDW5 730 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-216ENST00000567023 NSUN6Q8TEA1 469 aaKnown RBP16.61■□□□□ 0.25
COMMD4-216ENST00000567023 MAP4K1Q92918 833 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 SEMA6BQ9H3T3 888 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
COMMD4-216ENST00000567023 TMEM265A0A087WTH1 108 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 B4GALT4O60513 344 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 KPNA6O60684 536 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 CSF2RAP15509 400 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 TMEM240Q5SV17 173 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 RASIP1Q5U651 963 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 CCDC62Q6P9F0 684 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 OR6J1Q8NGC5 347 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 TAAR1Q96RJ0 339 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.25
COMMD4-216ENST00000567023 AMNQ9BXJ7 453 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 VAT1LQ9HCJ6 419 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 MAP3K20Q9NYL2 800 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms