RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 LSSP48449 732 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 TRAPPC3LQ5T215 181 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 TMC3Q7Z5M5 1100 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 FBXO11Q86XK2 927 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 ZC3H7AQ8IWR0 971 aaKnown RBP7.47□□□□□ -1.21
KARS-208ENST00000566772 PPIL6Q8IXY8 311 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 IFNL3Q8IZI9 196 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 DTWD1Q8N5C7 304 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 C2CD4AQ8NCU7 369 aaPredicted RBP7.47□□□□□ -1.21
KARS-208ENST00000566772 FRS2Q8WU20 508 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 CHTF18Q8WVB6 975 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 EMC7Q9NPA0 242 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 GPRC5CQ9NQ84 441 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 TMEFF2Q9UIK5 374 aaPredicted RBP7.47□□□□□ -1.21
KARS-208ENST00000566772 ZBTB21Q9ULJ3 1066 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 ZKSCAN5Q9Y2L8 839 aa7.47□□□□□ -1.21
KARS-208ENST00000566772 FZD9O00144 591 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 ARVCFO00192 962 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 IFRD1O00458 451 aaPredicted RBP7.46□□□□□ -1.22
KARS-208ENST00000566772 MEIS1O00470 390 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 MSCO60682 206 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 CKMP06732 381 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 THBDP07204 575 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 PF4V1P10720 104 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 ATP2A2P16615 1042 aaKnown RBP7.46□□□□□ -1.22
KARS-208ENST00000566772 NAT1P18440 290 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 ETV3P41162 512 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 GPR85P60893 370 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 DHX8Q14562 1220 aaKnown RBP7.46□□□□□ -1.22
KARS-208ENST00000566772 C10orf62Q5T681 223 aaPredicted RBP7.46□□□□□ -1.22
KARS-208ENST00000566772 HDGFL2Q7Z4V5 671 aaPredicted RBP7.46□□□□□ -1.22
KARS-208ENST00000566772 DCAF11Q8TEB1 546 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 AHCYL2Q96HN2 611 aaKnown RBP7.46□□□□□ -1.22
KARS-208ENST00000566772 SLC13A1Q9BZW2 595 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 LGR6Q9HBX8 967 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 TCF7L1Q9HCS4 588 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 PRR13Q9NZ81 148 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 B4GALT6Q9UBX8 382 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 ANKRD6Q9Y2G4 727 aa7.46□□□□□ -1.22
KARS-208ENST00000566772 SHISA8B8ZZ34 492 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 PPFIA4O75335 1185 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 TRIM27P14373 513 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 PURAQ00577 322 aaKnown RBP7.45□□□□□ -1.22
KARS-208ENST00000566772 SRSF11Q05519 484 aaKnown RBP7.45□□□□□ -1.22
KARS-208ENST00000566772 KLF1Q13351 362 aaPredicted RBP7.45□□□□□ -1.22
KARS-208ENST00000566772 IL31Q6EBC2 164 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 GPAT2Q6NUI2 795 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 C11orf96Q7Z7L8 435 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 CPA6Q8N4T0 437 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 PCDH19Q8TAB3 1148 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 NPLOC4Q8TAT6 608 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 USP33Q8TEY7 942 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 COPS5Q92905 334 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 ZFYVE21Q9BQ24 234 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 CABP5Q9NP86 173 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 NPFFR2Q9Y5X5 522 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 ST14Q9Y5Y6 855 aa7.45□□□□□ -1.22
KARS-208ENST00000566772 STXBP3O00186 592 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 DGKGP49619 791 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 NEK3P51956 506 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 ODF1Q14990 250 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 LONRF3Q496Y0 759 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 MINDY4Q4G0A6 757 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 TMEM177Q53S58 311 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 FDX2Q6P4F2 183 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 RSPO2Q6UXX9 243 aaPredicted RBP7.44□□□□□ -1.22
KARS-208ENST00000566772 PODNQ7Z5L7 613 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 CLRN3Q8NCR9 226 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 FAXDC2Q96IV6 333 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 CHST7Q9NS84 486 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 H2AFY2Q9P0M6 372 aaPredicted RBP7.44□□□□□ -1.22
KARS-208ENST00000566772 PNMA8BQ9ULN7 279 aaPredicted RBP7.44□□□□□ -1.22
KARS-208ENST00000566772 CNTNAP4Q9C0A0 1308 aa7.44□□□□□ -1.22
KARS-208ENST00000566772 A0A0A0MRY4 1105 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 C2orf71A6NGG8 1288 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 MEFVO15553 781 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 OIP5O43482 229 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 SIGLEC6O43699 453 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 ULK1O75385 1050 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 PRAMEF1O95521 474 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 U2AF1L5P0DN76 240 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 LCP1P13796 627 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 RAB6AP20340 208 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 AMPD1P23109 780 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 RECQLP46063 649 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 MECP2P51608 486 aaKnown RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 KPNA1P52294 538 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 U2AF1Q01081 240 aaKnown RBP eCLIP7.43□□□□□ -1.22
KARS-208ENST00000566772 POU4F1Q01851 419 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 FAPQ12884 760 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 RALBP1Q15311 655 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 ACBD5Q5T8D3 534 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 PGM2L1Q6PCE3 622 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 LBX2Q6XYB7 198 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 EPM2AIP1Q7L775 607 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 C11orf74Q86VG3 221 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 CCDC103Q8IW40 242 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 FMR1NBQ8N0W7 255 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 CHST14Q8NCH0 376 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms