RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 C21orf2O43822 256 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 FILIP1LQ4L180 1135 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 USP17L6PQ6QN14 398 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 ADSSL1Q8N142 457 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 SYT17Q9BSW7 474 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 PBX1P40424 430 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 KCNJ6P48051 423 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 ASIC1P78348 528 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 STK4Q13043 487 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 TCP11X2Q5H9J9 407 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 TRIM65Q6PJ69 517 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 IRF2BP1Q8IU81 584 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 C10orf71Q711Q0 1435 aa13.74□□□□□ -0.21
SCAMP2-207ENST00000566480 ESYT2A0FGR8 921 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 STX10O60499 249 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 GYPCP04921 128 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 SLC1A4P43007 532 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 JAG1P78504 1218 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 PDE4DQ08499 809 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 DYMQ7RTS9 669 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 CTAGE1Q96RT6 745 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 LRWD1Q9UFC0 647 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 NKRFO15226 690 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 POLD1P28340 1107 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 ETF1P62495 437 aaKnown RBP13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 PRMT6Q96LA8 375 aaPredicted RBP13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 TRIM47Q96LD4 638 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 MTMR9Q96QG7 549 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 PI4KBQ9UBF8 816 aa13.73□□□□□ -0.21
SCAMP2-207ENST00000566480 YDJCA8MPS7 323 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 ZBTB5O15062 677 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 GRB10Q13322 594 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 MCM6Q14566 821 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 RAD9BQ6WBX8 426 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 PDCL2Q8N4E4 241 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 ANKRD7Q92527 254 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 AK8Q96MA6 479 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 PSTPIP2Q9H939 334 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 SIPA1L1O43166 1804 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 RHOBTB3O94955 611 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 ERCC3P19447 782 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 UBXN1Q04323 297 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 QRICH1Q2TAL8 776 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 PPP4R3BQ5MIZ7 849 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 SPICE1Q8N0Z3 855 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 GIMAP8Q8ND71 665 aaPredicted RBP13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 WDR24Q96S15 920 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 MRPL44Q9H9J2 332 aaKnown RBP13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 SLC39A2Q9NP94 309 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 RIC8AQ9NPQ8 531 aa13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 LIMA1Q9UHB6 759 aaKnown RBP13.72□□□□□ -0.21
SCAMP2-207ENST00000566480 CLRN2A0PK11 232 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 PPIP5K2O43314 1243 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 ICA1Q05084 483 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 ECM1Q16610 540 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 USH1GQ495M9 461 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 GPATCH4Q5T3I0 446 aaKnown RBP13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 KCNK18Q7Z418 384 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 CUL5Q93034 780 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 CALML4Q96GE6 196 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 PNMA5Q96PV4 448 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 LZTFL1Q9NQ48 299 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 BLOC1S4Q9NUP1 217 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 MYH7BA7E2Y1 1941 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 KIF2AO00139 706 aaPredicted RBP13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 ZSCAN12O43309 604 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 MFAP3LO75121 409 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 IKQ13123 557 aaPredicted RBP13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 KCNB1Q14721 858 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 ELF2Q15723 593 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 STYK1Q6J9G0 422 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 EHD4Q9H223 541 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 EXOC1Q9NV70 894 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
SCAMP2-207ENST00000566480 LRRC10BA6NIK2 292 aa13.7□□□□□ -0.22
SCAMP2-207ENST00000566480 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
SCAMP2-207ENST00000566480 hCG_1984214I3L0E3 225 aa13.7□□□□□ -0.22
SCAMP2-207ENST00000566480 PSMA7O14818 248 aa13.7□□□□□ -0.22
SCAMP2-207ENST00000566480 MARCH6O60337 910 aa13.7□□□□□ -0.22
SCAMP2-207ENST00000566480 URI1O94763 535 aaPredicted RBP13.7□□□□□ -0.22
SCAMP2-207ENST00000566480 DPEP1P16444 411 aa13.7□□□□□ -0.22
SCAMP2-207ENST00000566480 YBX3P16989 372 aaKnown RBP eCLIP13.7□□□□□ -0.223e-7■□□□□ 9.4
SCAMP2-207ENST00000566480 GNG11P61952 73 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms