RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 NEK1Q96PY6 1258 aa25.1■■□□□ 1.61
SPG7-214ENST00000566371 SPC25Q9HBM1 224 aa25.1■■□□□ 1.61
SPG7-214ENST00000566371 DDX49Q9Y6V7 483 aaKnown RBP25.1■■□□□ 1.61
SPG7-214ENST00000566371 B4DLN1 442 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 CYTH3O43739 400 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 REC8O95072 547 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 EDNRBP24530 442 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 MRPL12P52815 198 aaKnown RBP25.09■■□□□ 1.61
SPG7-214ENST00000566371 ATN1P54259 1190 aaPredicted RBP25.09■■□□□ 1.61
SPG7-214ENST00000566371 GJA9P57773 515 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 NKX3-2P78367 333 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 C1orf53Q5VUE5 145 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 IQSEC1Q6DN90 963 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 TAPT1Q6NXT6 567 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 SLC39A5Q6ZMH5 540 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 SGMS1Q86VZ5 419 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 FBXO16Q8IX29 292 aaPredicted RBP25.09■■□□□ 1.61
SPG7-214ENST00000566371 RASEFQ8IZ41 740 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 LZTS2Q9BRK4 669 aa25.09■■□□□ 1.61
SPG7-214ENST00000566371 COLQQ9Y215 455 aaPredicted RBP25.09■■□□□ 1.61
SPG7-214ENST00000566371 RANBP2P49792 3224 aaKnown RBP25.09■■□□□ 1.61
SPG7-214ENST00000566371 MOXD2PA6NHM9 499 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 PPP1R11O60927 126 aaPredicted RBP25.08■■□□□ 1.61
SPG7-214ENST00000566371 CALM1P0DP23 149 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 CALM2P0DP24 149 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 CALM3P0DP25 149 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 SMARCA1P28370 1054 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 GHRHRQ02643 423 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 CCSAPQ6IQ19 270 aaPredicted RBP25.08■■□□□ 1.61
SPG7-214ENST00000566371 KCNB2Q92953 911 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 SPZ1Q9BXG8 430 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 GNEQ9Y223 722 aaKnown RBP25.08■■□□□ 1.61
SPG7-214ENST00000566371 PCDHA1Q9Y5I3 950 aa25.08■■□□□ 1.61
SPG7-214ENST00000566371 PNMA6FA0A0J9YX94 578 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.07■■□□□ 1.6
SPG7-214ENST00000566371 A0A1W2PQ45 241 aaPredicted RBP25.07■■□□□ 1.6
SPG7-214ENST00000566371 A0A1W2PQY0 241 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 C6orf222P0C671 652 aaPredicted RBP25.07■■□□□ 1.6
SPG7-214ENST00000566371 CHRDL2Q6WN34 429 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 EEPD1Q7L9B9 569 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 HOMER1Q86YM7 354 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 PCSK9Q8NBP7 692 aaKnown RBP25.07■■□□□ 1.6
SPG7-214ENST00000566371 SYTL5Q8TDW5 730 aaPredicted RBP25.07■■□□□ 1.6
SPG7-214ENST00000566371 FERMT2Q96AC1 680 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 PIGSQ96S52 555 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 MYL10Q9BUA6 226 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 MAP3K20Q9NYL2 800 aaKnown RBP25.07■■□□□ 1.6
SPG7-214ENST00000566371 Q9Y3F1 56 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 SLC12A7Q9Y666 1083 aa25.07■■□□□ 1.6
SPG7-214ENST00000566371 HMGB1P09429 215 aaKnown RBP25.06■■□□□ 1.6
SPG7-214ENST00000566371 SMPD1P17405 629 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 GNAQP50148 359 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 ACLYP53396 1101 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 RTP1P59025 263 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 EXOSC10Q01780 885 aaKnown RBP25.06■■□□□ 1.6
SPG7-214ENST00000566371 PDE4DQ08499 809 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 HABP4Q5JVS0 413 aaKnown RBP25.06■■□□□ 1.6
SPG7-214ENST00000566371 DHX32Q7L7V1 743 aaKnown RBP25.06■■□□□ 1.6
SPG7-214ENST00000566371 SAMD3Q8N6K7 520 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 NSUN6Q8TEA1 469 aaKnown RBP25.06■■□□□ 1.6
SPG7-214ENST00000566371 TBC1D5Q92609 795 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 PRO3102Q9H379 93 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 PDGFCQ9NRA1 345 aa25.06■■□□□ 1.6
SPG7-214ENST00000566371 ZMYND8Q9ULU4 1186 aaPredicted RBP25.06■■□□□ 1.6
SPG7-214ENST00000566371 RBM47A0AV96 593 aaKnown RBP25.05■■□□□ 1.6
SPG7-214ENST00000566371 MYADML2A6NDP7 307 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 OPLAHO14841 1288 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 EPB41L2O43491 1005 aaKnown RBP25.05■■□□□ 1.6
SPG7-214ENST00000566371 HSPA4P34932 840 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 HSD17B4P51659 736 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 KCNA10Q16322 511 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 ADCK5Q3MIX3 580 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 NOL8Q76FK4 1167 aaKnown RBP25.05■■□□□ 1.6
SPG7-214ENST00000566371 LRRC2Q9BYS8 371 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 COL20A1Q9P218 1284 aa25.05■■□□□ 1.6
SPG7-214ENST00000566371 CTAGE5O15320 804 aa25.04■■□□□ 1.6
SPG7-214ENST00000566371 DUSP28Q4G0W2 176 aa25.04■■□□□ 1.6
SPG7-214ENST00000566371 GNASQ5JWF2 1037 aa25.04■■□□□ 1.6
SPG7-214ENST00000566371 TLK2Q86UE8 772 aa25.04■■□□□ 1.6
SPG7-214ENST00000566371 IWS1Q96ST2 819 aa25.04■■□□□ 1.6
SPG7-214ENST00000566371 BAZ2BQ9UIF8 2168 aaKnown RBP25.03■■□□□ 1.6
SPG7-214ENST00000566371 CFBP00751 764 aa25.03■■□□□ 1.6
SPG7-214ENST00000566371 SYN1P17600 705 aa25.03■■□□□ 1.6
SPG7-214ENST00000566371 RRP36Q96EU6 259 aaKnown RBP25.03■■□□□ 1.6
SPG7-214ENST00000566371 RMDN3Q96TC7 470 aa25.03■■□□□ 1.6
SPG7-214ENST00000566371 AP5M1Q9H0R1 490 aa25.03■■□□□ 1.6
SPG7-214ENST00000566371 ATP11BQ9Y2G3 1177 aa25.03■■□□□ 1.6
SPG7-214ENST00000566371 ASGR1P07306 291 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 FSCN1Q16658 493 aaKnown RBP25.02■■□□□ 1.6
SPG7-214ENST00000566371 TRIM60Q495X7 471 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 FANCBQ8NB91 859 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 SCFD2Q8WU76 684 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 TAAR1Q96RJ0 339 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 GDF15Q99988 308 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 WDR11Q9BZH6 1224 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 STARD7Q9NQZ5 370 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 RBM27Q9P2N5 1060 aaKnown RBP25.02■■□□□ 1.6
SPG7-214ENST00000566371 ELP1O95163 1332 aa25.02■■□□□ 1.6
SPG7-214ENST00000566371 APOA5Q6Q788 366 aa25.01■■□□□ 1.59
SPG7-214ENST00000566371 SYNE3Q6ZMZ3 975 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms