RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NUP43Q8NFH3 380 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 MICAL1Q8TDZ2 1067 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 NBPF4Q96M43 638 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 LTBP3Q9NS15 1303 aa6.77□□□□□ -1.32
CHD9-215ENST00000565442 UBOX5O94941 541 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 PRAMEF1O95521 474 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 ZNF200P98182 395 aaPredicted RBP6.77□□□□□ -1.33
CHD9-215ENST00000565442 SERINC3Q13530 473 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 NT5DC1Q5TFE4 455 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 ZC3H14Q6PJT7 736 aaKnown RBP6.77□□□□□ -1.33
CHD9-215ENST00000565442 LIPIQ6XZB0 460 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 FERMT3Q86UX7 667 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 ERVK13-1Q9NX77 482 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 ACSL6Q9UKU0 697 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 PCDHB10Q9UN67 800 aa6.77□□□□□ -1.33
CHD9-215ENST00000565442 A0A1W2PQ45 241 aaPredicted RBP6.76□□□□□ -1.33
CHD9-215ENST00000565442 A0A1W2PQY0 241 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 SIGLEC6O43699 453 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 MSL3P1P0C860 447 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 ENDOUP21128 410 aaKnown RBP6.76□□□□□ -1.33
CHD9-215ENST00000565442 MAPKAPK2P49137 400 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 ADAM17P78536 824 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 FXNQ16595 210 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 C6orf15Q6UXA7 325 aaPredicted RBP6.76□□□□□ -1.33
CHD9-215ENST00000565442 TMEM192Q8IY95 271 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 SLC6A18Q96N87 628 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 PIF1Q9H611 641 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 FAM86C1Q9NVL1 165 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 SUSD2Q9UGT4 822 aa6.76□□□□□ -1.33
CHD9-215ENST00000565442 B2RBV5 119 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 MATN3O15232 486 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 DDAH1O94760 285 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 GJB6O95452 261 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 NR1I3Q14994 352 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 DDR2Q16832 855 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 NBPF12Q5TAG4 269 aaPredicted RBP6.75□□□□□ -1.33
CHD9-215ENST00000565442 ADGRG2Q8IZP9 1017 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD9-215ENST00000565442 SLC12A7Q9Y666 1083 aa6.75□□□□□ -1.33
CHD9-215ENST00000565442 A0A1B0GTL3 188 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
CHD9-215ENST00000565442 CCNFP41002 786 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 CEBPAP49715 358 aaPredicted RBP6.74□□□□□ -1.33
CHD9-215ENST00000565442 TARBP2Q15633 366 aaKnown RBP6.74□□□□□ -1.33
CHD9-215ENST00000565442 GNPTABQ3T906 1256 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 TDRD10Q5VZ19 366 aaKnown RBP6.74□□□□□ -1.33
CHD9-215ENST00000565442 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 FAM178BQ8IXR5 827 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 FNIP1Q8TF40 1166 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
CHD9-215ENST00000565442 CDADC1Q9BWV3 514 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 PHAXQ9H814 394 aaKnown RBP6.74□□□□□ -1.33
CHD9-215ENST00000565442 IMPACTQ9P2X3 320 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 SRRDQ9UH36 339 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 MINPP1Q9UNW1 487 aa6.74□□□□□ -1.33
CHD9-215ENST00000565442 CDK11AQ9UQ88 783 aaPredicted RBP6.74□□□□□ -1.33
CHD9-215ENST00000565442 FAM221BA6H8Z2 402 aa6.73□□□□□ -1.33
CHD9-215ENST00000565442 CLEC3AO75596 197 aa6.73□□□□□ -1.33
CHD9-215ENST00000565442 TP53P04637 393 aaPredicted RBP6.73□□□□□ -1.33
CHD9-215ENST00000565442 KIAA1211LQ6NV74 962 aa6.73□□□□□ -1.33
CHD9-215ENST00000565442 ZNF512BQ96KM6 892 aaPredicted RBP6.73□□□□□ -1.33
CHD9-215ENST00000565442 DHRS1Q96LJ7 313 aa6.73□□□□□ -1.33
CHD9-215ENST00000565442 PRDM14Q9GZV8 571 aa6.73□□□□□ -1.33
CHD9-215ENST00000565442 SMPD4Q9NXE4 827 aa6.73□□□□□ -1.33
CHD9-215ENST00000565442 SNTG2Q9NY99 539 aa6.73□□□□□ -1.33
CHD9-215ENST00000565442 ZNF214Q9UL59 606 aaPredicted RBP6.73□□□□□ -1.33
CHD9-215ENST00000565442 C9IYK1 514 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 ZNF205O95201 554 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 SLC7A5Q01650 507 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 NFE2L2Q16236 605 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 GIMAP6Q6P9H5 292 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 SAPCD2Q86UD0 394 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 PPFIBP1Q86W92 1011 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 KLHL6Q8WZ60 621 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 MKL1Q969V6 931 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 MRFAP1L1Q96HT8 127 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 DEPDC7Q96QD5 511 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 JMJD8Q96S16 334 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 CHST7Q9NS84 486 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 SUCOQ9UBS9 1254 aaKnown RBP6.72□□□□□ -1.33
CHD9-215ENST00000565442 PMF1-BGLAPU3KQ54 211 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 SHROOM4Q9ULL8 1493 aa6.72□□□□□ -1.33
CHD9-215ENST00000565442 SH3D21A4FU49 640 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 ITGB3P05106 788 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 FBLN1P23142 703 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 BMP8BP34820 402 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 CNR2P34972 360 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 PMS1P54277 932 aaKnown RBP6.71□□□□□ -1.34
CHD9-215ENST00000565442 FOXO4P98177 505 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 RASA3Q14644 834 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 MRM1Q6IN84 353 aaKnown RBP6.71□□□□□ -1.34
CHD9-215ENST00000565442 SLC16A11Q8NCK7 471 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 MSRB2Q9Y3D2 182 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 DUSP10Q9Y6W6 482 aa6.71□□□□□ -1.34
CHD9-215ENST00000565442 MEIS1O00470 390 aa6.7□□□□□ -1.34
CHD9-215ENST00000565442 PDPK1O15530 556 aa6.7□□□□□ -1.34
CHD9-215ENST00000565442 HTRA3P83110 453 aa6.7□□□□□ -1.34
CHD9-215ENST00000565442 NCAPHQ15003 741 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms