RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ERICH2A1L162 156 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 SNHG28P0DPA3 235 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 ACRP10323 421 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 TXNP10599 105 aaKnown RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 RPS6P62753 249 aaKnown RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 SMAD3P84022 425 aaKnown RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 PPIGQ13427 754 aaKnown RBP eCLIP7.49□□□□□ -1.21
TCF4-228ENST00000565393 CDC37Q16543 378 aaPredicted RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 DUSP28Q4G0W2 176 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 BRDTQ58F21 947 aaPredicted RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 FAM47CQ5HY64 1035 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 TTC22Q5TAA0 569 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 FBXO11Q86XK2 927 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 MCF2L2Q86YR7 1114 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 ENAHQ8N8S7 591 aaPredicted RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 DNERQ8NFT8 737 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 OR6J1Q8NGC5 347 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 MORC4Q8TE76 937 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 TBC1D5Q92609 795 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 TAAR1Q96RJ0 339 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 TRPV6Q9H1D0 765 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 MRPL11Q9Y3B7 192 aaKnown RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 U3KPZ7 1027 aaPredicted RBP7.49□□□□□ -1.21
TCF4-228ENST00000565393 ASTN1O14525 1302 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 TNKSO95271 1327 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 LOC102724159A0A0B4J2E5 919 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 KLRF2D3W0D1 207 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 DLL1O00548 723 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 IFIT3O14879 490 aaKnown RBP7.48□□□□□ -1.21
TCF4-228ENST00000565393 CFBP00751 764 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 FGBP02675 491 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 SUPT20HL2P0C7V6 817 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 CHMLP26374 656 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 CYP2C18P33260 490 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 CPT1AP50416 773 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 CCL23P55773 120 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 NKX3-2P78367 333 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 PWP2Q15269 919 aaKnown RBP7.48□□□□□ -1.21
TCF4-228ENST00000565393 ASPRV1Q53RT3 343 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 ARHGEF16Q5VV41 709 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 SEPT14Q6ZU15 432 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 ZNF365Q70YC5 407 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 RALYLQ86SE5 291 aaKnown RBP7.48□□□□□ -1.21
TCF4-228ENST00000565393 FAM126BQ8IXS8 530 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 RGS22Q8NE09 1264 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 NSUN6Q8TEA1 469 aaKnown RBP7.48□□□□□ -1.21
TCF4-228ENST00000565393 CDX2Q99626 313 aaPredicted RBP7.48□□□□□ -1.21
TCF4-228ENST00000565393 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.48□□□□□ -1.21
TCF4-228ENST00000565393 HIPK3Q9H422 1215 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 JMJD4Q9H9V9 463 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 POLR3EQ9NVU0 708 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 TBX21Q9UL17 535 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 ABCB11O95342 1321 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 WDR19Q8NEZ3 1342 aa7.48□□□□□ -1.21
TCF4-228ENST00000565393 RBM47A0AV96 593 aaKnown RBP7.47□□□□□ -1.21
TCF4-228ENST00000565393 NKRFO15226 690 aaKnown RBP eCLIP7.47□□□□□ -1.21
TCF4-228ENST00000565393 KPNA6O60684 536 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 CD4P01730 458 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 GSPT1P15170 499 aaKnown RBP7.47□□□□□ -1.21
TCF4-228ENST00000565393 PTH1RQ03431 593 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 TTLL4Q14679 1199 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 PPP2R5BQ15173 497 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 STXBP2Q15833 593 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 LY6KQ17RY6 165 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 QRICH1Q2TAL8 776 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 TMEM240Q5SV17 173 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 CYB5R4Q7L1T6 521 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 C16orf59Q7L2K0 433 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 CHST3Q7LGC8 479 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 OTOP2Q7RTS6 562 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 RPUSD2Q8IZ73 545 aaKnown RBP7.47□□□□□ -1.21
TCF4-228ENST00000565393 SLC43A3Q8NBI5 491 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 RETREG2Q8NC44 543 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 NCOA7Q8NI08 942 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 SYTL5Q8TDW5 730 aaPredicted RBP7.47□□□□□ -1.21
TCF4-228ENST00000565393 SCFD2Q8WU76 684 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 COPS5Q92905 334 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 RMDN3Q96TC7 470 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 MTG1Q9BT17 334 aaPredicted RBP7.47□□□□□ -1.21
TCF4-228ENST00000565393 AMNQ9BXJ7 453 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 SEZ6LQ9BYH1 1024 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 IL25Q9H293 177 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 PCDHA1Q9Y5I3 950 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 GRIN2DO15399 1336 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 RAD50Q92878 1312 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
TCF4-228ENST00000565393 RLFQ13129 1914 aa7.46□□□□□ -1.21
TCF4-228ENST00000565393 ZNF236Q9UL36 1845 aa7.46□□□□□ -1.21
TCF4-228ENST00000565393 GRXCR1A8MXD5 290 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 E7EWF7 191 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 B4GALT4O60513 344 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 CYP21A2P08686 494 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 MYCLP12524 364 aaPredicted RBP7.46□□□□□ -1.22
TCF4-228ENST00000565393 EIF2AK2P19525 551 aaKnown RBP7.46□□□□□ -1.22
TCF4-228ENST00000565393 PURAQ00577 322 aaKnown RBP7.46□□□□□ -1.22
TCF4-228ENST00000565393 TRAF1Q13077 416 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 WTAPQ15007 396 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 SART3Q15020 963 aaKnown RBP7.46□□□□□ -1.22
TCF4-228ENST00000565393 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms