RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TRAF1Q13077 416 aa12.72□□□□□ -0.37
SF3B3-205ENST00000564899 TREML2Q5T2D2 321 aa12.72□□□□□ -0.37
SF3B3-205ENST00000564899 GALNT17Q6IS24 598 aa12.72□□□□□ -0.37
SF3B3-205ENST00000564899 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
SF3B3-205ENST00000564899 FASTKD5Q7L8L6 764 aaKnown RBP12.72□□□□□ -0.37
SF3B3-205ENST00000564899 GBP4Q96PP9 640 aa12.72□□□□□ -0.37
SF3B3-205ENST00000564899 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-205ENST00000564899 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-205ENST00000564899 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
SF3B3-205ENST00000564899 ESYT2A0FGR8 921 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 SMCO2A6NFE2 343 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 BTBD18B2RXH4 712 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 EVI5O60447 810 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 ZBED4O75132 1171 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 SGPL1O95470 568 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 INHAP05111 366 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 FDX1P10109 184 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 DSG3P32926 999 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 FLT3LGP49771 235 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 NPY5RQ15761 445 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 USH1GQ495M9 461 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 BRAPQ7Z569 592 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 ATG4CQ96DT6 458 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 DEFB118Q96PH6 123 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 C6orf50Q9HD87 102 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 AGTPBP1Q9UPW5 1226 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
SF3B3-205ENST00000564899 PTPRFP10586 1907 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 ADCY3O60266 1144 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 BAG4O95429 457 aaKnown RBP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 ICAM1P05362 532 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 TAL1P17542 331 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 U2AF2P26368 475 aaKnown RBP eCLIP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 GNA11P29992 359 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 ADCY7P51828 1080 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 NR5A1Q13285 461 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 COG2Q14746 738 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 FAM173BQ6P4H8 233 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 NOSTRINQ8IVI9 506 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 DAGLBQ8NCG7 672 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 BICD2Q8TD16 824 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 PAWRQ96IZ0 340 aaKnown RBP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 SLC38A10Q9HBR0 1119 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-205ENST00000564899 LOC285556D6RIA3 1793 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 MYH6P13533 1939 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 MUC3AQ02505 3323 aa12.7□□□□□ -0.38
SF3B3-205ENST00000564899 SPDYE16A6NNV3 312 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-205ENST00000564899 VWA5AO00534 786 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
SF3B3-205ENST00000564899 FCGRTP55899 365 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 UBXN2AP68543 259 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 DNM1Q05193 864 aaKnown RBP12.69□□□□□ -0.38
SF3B3-205ENST00000564899 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 CUL5Q93034 780 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 GDF15Q99988 308 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 RAVER2Q9HCJ3 691 aaKnown RBP12.69□□□□□ -0.38
SF3B3-205ENST00000564899 PAK6Q9NQU5 681 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-205ENST00000564899 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 PNMA2Q9UL42 364 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
SF3B3-205ENST00000564899 ZNF536O15090 1300 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 ABCB11O95342 1321 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 SYN1P17600 705 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 HOXD10P28358 340 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 MRPL12P52815 198 aaKnown RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 KRT85P78386 507 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 TRIM32Q13049 653 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 MYSM1Q5VVJ2 828 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 C7orf61Q8IZ16 206 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 REXO1Q8N1G1 1221 aaKnown RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 DEFB123Q8N688 67 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 REPS2Q8NFH8 660 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 RASGRP4Q8TDF6 673 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 TNFRSF25Q93038 417 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 PSTPIP2Q9H939 334 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 RIC8AQ9NPQ8 531 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 ADAMTS5Q9UNA0 930 aa12.68□□□□□ -0.38
SF3B3-205ENST00000564899 MRPL11Q9Y3B7 192 aaKnown RBP12.68□□□□□ -0.38
SF3B3-205ENST00000564899 CCDC194A0A1B0GVG4 234 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 M0R2N6 131 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms