RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KANK3Q6NY19 840 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 BAZ2BQ9UIF8 2168 aaKnown RBP18.1■□□□□ 0.49
LINC00554-201ENST00000564841 ABCC12Q96J65 1359 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 PPP1R37O75864 691 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 UQCRFS1P1P0C7P4 283 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 RNASE9P60153 205 aaKnown RBP18.09■□□□□ 0.49
LINC00554-201ENST00000564841 MAP3K12Q12852 859 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 NAA25Q14CX7 972 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 ZNF174Q15697 407 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 HAUS3Q68CZ6 603 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 CYB5D1Q6P9G0 228 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 LCORLQ8N3X6 602 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.09■□□□□ 0.49
LINC00554-201ENST00000564841 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 XDHP47989 1333 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 CDR1P51861 262 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 BIRC2Q13490 618 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 QPCTQ16769 361 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 WLSQ5T9L3 541 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 EGFL6Q8IUX8 553 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 IFNL3Q8IZI9 196 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 NLRP3Q96P20 1036 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 STRBPQ96SI9 672 aaKnown RBP18.09■□□□□ 0.49
LINC00554-201ENST00000564841 OSBPL7Q9BZF2 842 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
LINC00554-201ENST00000564841 NHEJ1Q9H9Q4 299 aaPredicted RBP18.09■□□□□ 0.49
LINC00554-201ENST00000564841 LRRC10BA6NIK2 292 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 TRIM37O94972 964 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 GLI1P08151 1106 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 PARP9Q8IXQ6 854 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 CERKQ8TCT0 537 aa18.09■□□□□ 0.49
LINC00554-201ENST00000564841 RBM12Q9NTZ6 932 aaKnown RBP18.09■□□□□ 0.49
LINC00554-201ENST00000564841 C4AP0C0L4 1744 aa18.08■□□□□ 0.49
LINC00554-201ENST00000564841 C4BP0C0L5 1744 aa18.08■□□□□ 0.49
LINC00554-201ENST00000564841 PPP1R12AO14974 1030 aaPredicted RBP18.08■□□□□ 0.49
LINC00554-201ENST00000564841 RPS6KA4O75676 772 aa18.08■□□□□ 0.49
LINC00554-201ENST00000564841 NR1D1P20393 614 aa18.08■□□□□ 0.49
LINC00554-201ENST00000564841 FUKQ8N0W3 1084 aa18.08■□□□□ 0.49
LINC00554-201ENST00000564841 PROCA1Q8NCQ7 364 aaPredicted RBP18.08■□□□□ 0.49
LINC00554-201ENST00000564841 GPR101Q96P66 508 aaPredicted RBP18.08■□□□□ 0.49
LINC00554-201ENST00000564841 MTMR7Q9Y216 660 aa18.08■□□□□ 0.49
LINC00554-201ENST00000564841 PARP1P09874 1014 aaKnown RBP18.08■□□□□ 0.48
LINC00554-201ENST00000564841 PAK1Q13153 545 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 TEX11Q8IYF3 940 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 MB21D1Q8N884 522 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 OR2W6PQ8NHA6 318 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 RPGRIP1Q96KN7 1286 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 SNX12Q9UMY4 172 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 SLC4A4Q9Y6R1 1079 aa18.08■□□□□ 0.48
LINC00554-201ENST00000564841 MYO5AQ9Y4I1 1855 aaKnown RBP18.08■□□□□ 0.48
LINC00554-201ENST00000564841 B4DLN1 442 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 TMOD1P28289 359 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 SNCBQ16143 134 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 CCDC70Q6NSX1 233 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 STIM2Q9P246 746 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 NARFQ9UHQ1 456 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 EME2A4GXA9 379 aaPredicted RBP18.07■□□□□ 0.48
LINC00554-201ENST00000564841 FMNL1O95466 1100 aaPredicted RBP18.07■□□□□ 0.48
LINC00554-201ENST00000564841 PRCPP42785 496 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 EPHB4P54760 987 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 TSR1Q2NL82 804 aaKnown RBP18.07■□□□□ 0.48
LINC00554-201ENST00000564841 CFAP58Q5T655 872 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 GSDMAQ96QA5 445 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 MINPP1Q9UNW1 487 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 MYH3P11055 1940 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 MYH10P35580 1976 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 EPB41P11171 864 aaKnown RBP18.07■□□□□ 0.48
LINC00554-201ENST00000564841 ARID4AP29374 1257 aaPredicted RBP18.07■□□□□ 0.48
LINC00554-201ENST00000564841 TRAPPC3LQ5T215 181 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 MMGT1Q8N4V1 131 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 ZNF579Q8NAF0 562 aaKnown RBP18.07■□□□□ 0.48
LINC00554-201ENST00000564841 PIK3R5Q8WYR1 880 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 DNAJC7Q99615 494 aa18.07■□□□□ 0.48
LINC00554-201ENST00000564841 RASSF10A6NK89 507 aa18.06■□□□□ 0.48
LINC00554-201ENST00000564841 CYP7A1P22680 504 aa18.06■□□□□ 0.48
LINC00554-201ENST00000564841 TPTE2Q6XPS3 522 aa18.06■□□□□ 0.48
LINC00554-201ENST00000564841 SEMA3EO15041 775 aa18.06■□□□□ 0.48
LINC00554-201ENST00000564841 COL4A1P02462 1669 aa18.06■□□□□ 0.48
LINC00554-201ENST00000564841 MDH1P40925 334 aaKnown RBP18.06■□□□□ 0.48
LINC00554-201ENST00000564841 CYFIP2Q96F07 1278 aa18.06■□□□□ 0.48
LINC00554-201ENST00000564841 EPB41L5Q9HCM4 733 aa18.06■□□□□ 0.48
LINC00554-201ENST00000564841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.05■□□□□ 0.48
LINC00554-201ENST00000564841 GOLGA6L7A0A1B0GV03 622 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 PEX19P40855 299 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 RPS8P62241 208 aaKnown RBP18.05■□□□□ 0.48
LINC00554-201ENST00000564841 KDM7AQ6ZMT4 941 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 MFSD6Q6ZSS7 791 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 CCDC121Q6ZUS5 278 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 MICALCLQ6ZW33 695 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 IQCKQ8N0W5 287 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 PCMTD1Q96MG8 357 aaPredicted RBP18.05■□□□□ 0.48
LINC00554-201ENST00000564841 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 ERCC3P19447 782 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 TRIM21P19474 475 aaKnown RBP18.05■□□□□ 0.48
LINC00554-201ENST00000564841 INHBEP58166 350 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms